RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 GPR34Q9UPC5 381 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 SSUH2Q9Y2M2 353 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 CFAP46Q8IYW2 2715 aa18.27■□□□□ 0.51
GTF3A-204ENST00000438571 CCDC187A0A096LP49 1063 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 ARHGAP42A6NI28 874 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 A8MX80 341 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 AGRPO00253 132 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 DFFAO00273 331 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 PALMO75781 387 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 RECQL5O94762 991 aaPredicted RBP18.26■□□□□ 0.51
GTF3A-204ENST00000438571 TNFSF15O95150 251 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 HGFP14210 728 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 TCF4P15884 667 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 MIPP30301 263 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 BLKP51451 505 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 MTM1Q13496 603 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 AGERQ15109 404 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 ELOCQ15369 112 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 PPP6R3Q5H9R7 873 aaPredicted RBP18.26■□□□□ 0.51
GTF3A-204ENST00000438571 ERMARDQ5T6L9 678 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 LIPIQ6XZB0 460 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 CCL4L1Q8NHW4 92 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 WDR36Q8NI36 951 aaKnown RBP18.26■□□□□ 0.51
GTF3A-204ENST00000438571 HCAR2Q8TDS4 363 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 TUBGCP5Q96RT8 1024 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 SP110Q9HB58 689 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 EPB41L5Q9HCM4 733 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 BSNQ9UPA5 3926 aa18.26■□□□□ 0.51
GTF3A-204ENST00000438571 TMEM191CA6NGB0 347 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 D6RAR5 112 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 ERVH48-1M5A8F1 160 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 TRAFD1O14545 582 aaPredicted RBP18.25■□□□□ 0.51
GTF3A-204ENST00000438571 LRCH4O75427 683 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 RPLP0P05388 317 aaKnown RBP18.25■□□□□ 0.51
GTF3A-204ENST00000438571 ALPIP09923 528 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 PLA2G2AP14555 144 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 HTR1BP28222 390 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 SERPINA4P29622 427 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 HTR7P34969 479 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 CFHR1Q03591 330 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 SRSF6Q13247 344 aaKnown RBP18.25■□□□□ 0.51
GTF3A-204ENST00000438571 CLN3Q13286 438 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 GRM3Q14832 879 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 TAF1BQ53T94 588 aaPredicted RBP18.25■□□□□ 0.51
GTF3A-204ENST00000438571 KIAA1614Q5VZ46 1190 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 ZNF571Q7Z3V5 609 aaPredicted RBP18.25■□□□□ 0.51
GTF3A-204ENST00000438571 CLEC14AQ86T13 490 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 LSM14AQ8ND56 463 aaKnown RBP18.25■□□□□ 0.51
GTF3A-204ENST00000438571 TTC9Q92623 222 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 RBM15Q96T37 977 aaKnown RBP eCLIP18.25■□□□□ 0.51
GTF3A-204ENST00000438571 LGR4Q9BXB1 951 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 DPH1Q9BZG8 443 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 HAUS4Q9H6D7 363 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 ATP13A3Q9H7F0 1226 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 PARVAQ9NVD7 372 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 ETNK2Q9NVF9 386 aa18.25■□□□□ 0.51
GTF3A-204ENST00000438571 ATXN7L1Q9ULK2 861 aaPredicted RBP18.25■□□□□ 0.51
GTF3A-204ENST00000438571 ZNF462Q96JM2 2506 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 TMEM110-MUSTN1A8MSY1 372 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 DDX3XO00571 662 aaKnown RBP eCLIP18.24■□□□□ 0.515e-21■■■■■ 78.7
GTF3A-204ENST00000438571 ELFN1P0C7U0 828 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 KRT10P13645 584 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 CSNK1DP48730 415 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 UCNP55089 124 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 KIAA1024LP59773 190 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 TYRO3Q06418 890 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 BCL2L1Q07817 233 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 VAC14Q08AM6 782 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 SLC10A7Q0GE19 358 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 DPYSQ14117 519 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 LY6DQ14210 128 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 PTPRRQ15256 657 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 ASIC2Q16515 512 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 DPPA4Q7L190 304 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 GKN2Q86XP6 184 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 GPR156Q8NFN8 814 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 GRAMD1AQ96CP6 724 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 LIN37Q96GY3 246 aaPredicted RBP18.24■□□□□ 0.51
GTF3A-204ENST00000438571 TMEM168Q9H0V1 697 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 RTN4Q9NQC3 1192 aaKnown RBP18.24■□□□□ 0.51
GTF3A-204ENST00000438571 CWC15Q9P013 229 aaKnown RBP18.24■□□□□ 0.51
GTF3A-204ENST00000438571 B4GALT6Q9UBX8 382 aa18.24■□□□□ 0.51
GTF3A-204ENST00000438571 CNOT8Q9UFF9 292 aaKnown RBP18.24■□□□□ 0.51
GTF3A-204ENST00000438571 DAPK3O43293 454 aa18.23■□□□□ 0.51
GTF3A-204ENST00000438571 NOBOXO60393 691 aa18.23■□□□□ 0.51
GTF3A-204ENST00000438571 TNFP01375 233 aa18.23■□□□□ 0.51
GTF3A-204ENST00000438571 IL1R2P27930 398 aa18.23■□□□□ 0.51
GTF3A-204ENST00000438571 SCNN1BP51168 640 aa18.23■□□□□ 0.51
GTF3A-204ENST00000438571 IL10RBQ08334 325 aa18.23■□□□□ 0.51
GTF3A-204ENST00000438571 SMTNL2Q2TAL5 461 aa18.23■□□□□ 0.51
GTF3A-204ENST00000438571 LVRNQ6Q4G3 990 aa18.23■□□□□ 0.51
GTF3A-204ENST00000438571 TMPRSS9Q7Z410 1059 aa18.23■□□□□ 0.51
GTF3A-204ENST00000438571 PGBD5Q8N414 524 aa18.23■□□□□ 0.51
GTF3A-204ENST00000438571 OR56A4Q8NGH8 313 aa18.23■□□□□ 0.51
GTF3A-204ENST00000438571 WDR48Q8TAF3 677 aa18.23■□□□□ 0.51
GTF3A-204ENST00000438571 ZNF653Q96CK0 615 aa18.23■□□□□ 0.51
GTF3A-204ENST00000438571 GFM1Q96RP9 751 aaKnown RBP18.23■□□□□ 0.51
GTF3A-204ENST00000438571 LRRN3Q9H3W5 708 aa18.23■□□□□ 0.51
GTF3A-204ENST00000438571 SUDS3Q9H7L9 328 aaPredicted RBP18.23■□□□□ 0.51
GTF3A-204ENST00000438571 TMEM63CQ9P1W3 806 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms