RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ATG16L2Q8NAA4 619 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 FBXO30Q8TB52 745 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 RORBQ92753 470 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 NTAN1Q96AB6 310 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 ZFP42Q96MM3 310 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 KLHL5Q96PQ7 755 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 MTG1Q9BT17 334 aaPredicted RBP6.71□□□□□ -1.33
CSDE1-205ENST00000438362 DHRS4Q9BTZ2 278 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 ATP13A1Q9HD20 1204 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 MOCS1Q9NZB8 636 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 UBA2Q9UBT2 640 aaPredicted RBP6.71□□□□□ -1.33
CSDE1-205ENST00000438362 LSM7Q9UK45 103 aaKnown RBP6.71□□□□□ -1.33
CSDE1-205ENST00000438362 TSC22D4Q9Y3Q8 395 aa6.71□□□□□ -1.33
CSDE1-205ENST00000438362 A0A088AWK7 358 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 KRT8P05787 483 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 MMP3P08254 477 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 GM2AP17900 193 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 NNMTP40261 264 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 MTTPP55157 894 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 ATP6V0D1P61421 351 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 RHOAP61586 193 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 USP46P62068 366 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 GHRHRQ02643 423 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 CSTF3Q12996 717 aaKnown RBP6.71□□□□□ -1.34
CSDE1-205ENST00000438362 DDX39BQ13838 428 aaKnown RBP6.71□□□□□ -1.34
CSDE1-205ENST00000438362 ARHGEF7Q14155 803 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 TIGD2Q4W5G0 525 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 TMEM63BQ5T3F8 832 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 GPR158Q5T848 1215 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 RAP1GAP2Q684P5 730 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 CYS1Q717R9 158 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 LGI2Q8N0V4 545 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 CBR4Q8N4T8 237 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 ZMAT2Q96NC0 199 aaKnown RBP6.71□□□□□ -1.34
CSDE1-205ENST00000438362 DGCR6LQ9BY27 220 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 NFKBIZQ9BYH8 718 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 SENP6Q9GZR1 1112 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-205ENST00000438362 ELOVL6Q9H5J4 265 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 EXOSC4Q9NPD3 245 aaKnown RBP6.71□□□□□ -1.34
CSDE1-205ENST00000438362 C8orf4Q9NR00 106 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 PIGVQ9NUD9 493 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 IMPAD1Q9NX62 359 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 DAPK2Q9UIK4 370 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 TNPO3Q9Y5L0 923 aaKnown RBP6.71□□□□□ -1.34
CSDE1-205ENST00000438362 SNX10Q9Y5X0 201 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 TOGARAM1Q9Y4F4 1720 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 NEMP2A6NFY4 417 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 MATN3O15232 486 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 SPTLC1O15269 473 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 CD3EAPO15446 510 aaKnown RBP6.71□□□□□ -1.34
CSDE1-205ENST00000438362 FAM189A1O60320 539 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 SEC22BO75396 215 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 H6PDO95479 791 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 F7P08709 466 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-205ENST00000438362 ZNF7P17097 686 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-205ENST00000438362 ITGB6P18564 788 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 CYP3A5P20815 502 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 IFNA8P32881 189 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 CDH18Q13634 790 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 ACAP2Q15057 778 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 NADK2Q4G0N4 442 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 PRAMEF19Q5SWL8 479 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 NOL9Q5SY16 702 aaKnown RBP6.71□□□□□ -1.34
CSDE1-205ENST00000438362 TTC23LQ6PF05 361 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 TMEM26Q6ZUK4 368 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 CDYL2Q8N8U2 506 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 SETD9Q8NE22 299 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 LPPQ93052 612 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 TEPSINQ96N21 525 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 TBCDQ9BTW9 1192 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 PCDHAC1Q9H158 963 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 PIDD1Q9HB75 910 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 FAM105AQ9NUU6 356 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 ZMYM5Q9UJ78 669 aa6.71□□□□□ -1.34
CSDE1-205ENST00000438362 COPG1Q9Y678 874 aaKnown RBP6.71□□□□□ -1.34
CSDE1-205ENST00000438362 ARAP2Q8WZ64 1704 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 MAST2Q6P0Q8 1798 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 MYBPHLA2RUH7 354 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 STX16-NPEPL1H3BU86 382 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 MATN2O00339 956 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 MSI1O43347 362 aaKnown RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 ONECUT3O60422 494 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 SNNO75324 88 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 STAU1O95793 577 aaKnown RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 FGF1P05230 155 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 HLA-DPA1P20036 260 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 CCNA2P20248 432 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 WARSP23381 471 aaKnown RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 MRPS15P82914 257 aaKnown RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 MTA1Q13330 715 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 ITGADQ13349 1161 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 PGS1Q32NB8 556 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 VPS26BQ4G0F5 336 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 SH3D19Q5HYK7 790 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 KIAA0930Q6ICG6 404 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 GPRIN3Q6ZVF9 776 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 TAC4Q86UU9 113 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 ZC3HC1Q86WB0 502 aaKnown RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 ADHFE1Q8IWW8 467 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 PLD6Q8N2A8 252 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms