RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 RAMP2O60895 175 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 RNASEH2AO75792 299 aaKnown RBP16.81■□□□□ 0.28
TTC3-209ENST00000438055 PSMC3P17980 439 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 MLLT6P55198 1093 aaPredicted RBP16.81■□□□□ 0.28
TTC3-209ENST00000438055 RBM44Q6ZP01 1051 aaKnown RBP16.81■□□□□ 0.28
TTC3-209ENST00000438055 SCD5Q86SK9 330 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 LILRA2Q8N149 483 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 PTCD2Q8WV60 388 aaKnown RBP16.81■□□□□ 0.28
TTC3-209ENST00000438055 DLG3Q92796 817 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 DDX18Q9NVP1 670 aaKnown RBP16.81■□□□□ 0.28
TTC3-209ENST00000438055 GMIPQ9P107 970 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 MARCH4Q9P2E8 410 aaPredicted RBP16.81■□□□□ 0.28
TTC3-209ENST00000438055 SUPT3HB4E1H0 165 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 SUPT3HO75486 399 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 GLP2RO95838 553 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 FAM58BPP0C7Q3 252 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 HSPA8P11142 646 aaKnown RBP16.81■□□□□ 0.28
TTC3-209ENST00000438055 SLC2A3P11169 496 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 OR1E1P30953 314 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 SQLEQ14534 574 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 POLD3Q15054 466 aaPredicted RBP16.81■□□□□ 0.28
TTC3-209ENST00000438055 SLC5A9Q2M3M2 681 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 GLB1LQ6UWU2 654 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 SLC22A9Q8IVM8 553 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 FBXO32Q969P5 355 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 CIB1Q99828 191 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 ZYG11BQ9C0D3 744 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 SMOC2Q9H3U7 446 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 SARS2Q9NP81 518 aaKnown RBP16.81■□□□□ 0.28
TTC3-209ENST00000438055 TNFRSF12AQ9NP84 129 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 IGSF5Q9NSI5 407 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 BTRCQ9Y297 605 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 PTGDR2Q9Y5Y4 395 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 SLC4A7Q9Y6M7 1214 aa16.81■□□□□ 0.28
TTC3-209ENST00000438055 PLXNA1Q9UIW2 1896 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 ANGPT2O15123 496 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 BRCA1P38398 1863 aaKnown RBP16.8■□□□□ 0.28
TTC3-209ENST00000438055 GRIA3P42263 894 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 TECRLQ5HYJ1 363 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 FAM171BQ6P995 826 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 MPP4Q96JB8 637 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 B3GALT6Q96L58 329 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 SPAG4Q9NPE6 437 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 SLC27A5Q9Y2P5 690 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 ARHGEF37A1IGU5 675 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 SAC3D1A6NKF1 404 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 GIPC1O14908 333 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 BCAS2O75934 225 aaPredicted RBP16.8■□□□□ 0.28
TTC3-209ENST00000438055 ADSLP30566 484 aaPredicted RBP16.8■□□□□ 0.28
TTC3-209ENST00000438055 TRIM25Q14258 630 aaKnown RBP16.8■□□□□ 0.28
TTC3-209ENST00000438055 MGAT5BQ3V5L5 792 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 MORN1Q5T089 497 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 PIK3R6Q5UE93 754 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 ADCY4Q8NFM4 1077 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 TRPC4APQ8TEL6 797 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 NAT14Q8WUY8 206 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 DNAJC1Q96KC8 554 aaKnown RBP16.8■□□□□ 0.28
TTC3-209ENST00000438055 EXOC2Q96KP1 924 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 SLC25A23Q9BV35 468 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 MRPL40Q9NQ50 206 aaKnown RBP16.8■□□□□ 0.28
TTC3-209ENST00000438055 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.8■□□□□ 0.28
TTC3-209ENST00000438055 EGFL7Q9UHF1 273 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 PCDHGB4Q9UN71 923 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 PCDHGB5Q9Y5G0 923 aa16.8■□□□□ 0.28
TTC3-209ENST00000438055 GJB3O75712 270 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 SEC24DO94855 1032 aaPredicted RBP16.79■□□□□ 0.28
TTC3-209ENST00000438055 GRIA2P42262 883 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 DYNC1I2Q13409 638 aaKnown RBP16.79■□□□□ 0.28
TTC3-209ENST00000438055 KIAA0408Q6ZU52 694 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 NUP93Q8N1F7 819 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 CFAP52Q8N1V2 620 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 CPSF7Q8N684 471 aaKnown RBP16.79■□□□□ 0.28
TTC3-209ENST00000438055 PBXIP1Q96AQ6 731 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 NOL11Q9H8H0 719 aaKnown RBP16.79■□□□□ 0.28
TTC3-209ENST00000438055 TREX1Q9NSU2 369 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 ARL5AQ9Y689 179 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 V9GYQ6 96 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 ANKRD12Q6UB98 2062 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 LRRC14BA6NHZ5 514 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 TARM1B6A8C7 271 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 CLGNO14967 610 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 NRP2O60462 931 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 TNFAIP8O95379 198 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 ZNF33AQ06730 810 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 MTX3Q5HYI7 312 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 MYO1HQ8N1T3 1032 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 CACNA2D2Q9NY47 1150 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 UBAP1Q9NZ09 502 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 TIPRLO75663 272 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 RHOBTB1O94844 696 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 RPL5P46777 297 aaKnown RBP16.79■□□□□ 0.28
TTC3-209ENST00000438055 CDKN2DP55273 166 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 HERC3Q15034 1050 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 SCIMPQ6UWF3 145 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 CILP2Q8IUL8 1156 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 CNTN4Q8IWV2 1026 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 PCYOX1LQ8NBM8 494 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 TMEM79Q9BSE2 394 aa16.79■□□□□ 0.28
TTC3-209ENST00000438055 SENP6Q9GZR1 1112 aaPredicted RBP16.79■□□□□ 0.28
TTC3-209ENST00000438055 RNF103-CHMP3A0A140T963 221 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms