RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 CD101Q93033 1021 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 ISL2Q96A47 359 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 RBM14Q96PK6 669 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 OSBPL10Q9BXB5 764 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 ZYG11BQ9C0D3 744 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 RAB6CQ9H0N0 254 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 MFSD1Q9H3U5 465 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 HPS4Q9NQG7 708 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 DNAJC17Q9NVM6 304 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 ARGLU1Q9NWB6 273 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 GPATCH2LQ9NWQ4 482 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 CACNA2D2Q9NY47 1150 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 PLK2Q9NYY3 685 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 GTSE1Q9NYZ3 720 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 ZIM2Q9NZV7 527 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 SIRPGQ9P1W8 387 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 DEC1Q9P2X7 70 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 WNT16Q9UBV4 365 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 OR12D3Q9UGF7 316 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 CA14Q9ULX7 337 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 WDR37Q9Y2I8 494 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 MRPS17Q9Y2R5 130 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 HYOU1Q9Y4L1 999 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 SNX10Q9Y5X0 201 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 DGKBQ9Y6T7 804 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 DUSP10Q9Y6W6 482 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 PIAS3Q9Y6X2 628 aa6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 HELZP42694 1942 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-208ENST00000436638 TCF20Q9UGU0 1960 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 A0A0U1RQJ8 604 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 A0A1B0GVM2 712 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 ESYT3A0FGR9 886 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 LRRD1A4D1F6 860 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 GRID2IPA4D2P6 1211 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 SYNDIG1LA6NDD5 238 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 TBC1D3BA6NDS4 549 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 TCAF2A6NFQ2 919 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 MIF4GDA9UHW6 222 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 SPECC1L-ADORA2AF8WAN1 911 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 J3KRW8 73 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 NCAM2O15394 837 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 FGF10O15520 208 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 GREM1O60565 184 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 ZNF254O75437 659 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 CLDN11O75508 207 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 LRIG2O94898 1065 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 LUC7L3O95232 432 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 APBB3O95704 486 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 PAHP00439 452 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 FAM87AP0C7U9 286 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 MTHFD1P11586 935 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 TYRP1P17643 537 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 IL1R2P27930 398 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 GJA4P35212 333 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 EIF2DP41214 584 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 SOX9P48436 509 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 TAS2R40P59535 323 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 RPS24P62847 133 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 ZXDAP98168 799 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 SLC25A11Q02978 314 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 SP140Q13342 867 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 MLC1Q15049 377 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 CPSF6Q16630 551 aaKnown RBP eCLIP6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 HS1BP3Q53T59 392 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 ZNF569Q5MCW4 686 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 LRRC38Q5VT99 294 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 DAB2IPQ5VWQ8 1189 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 FYB2Q5VWT5 728 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 NXNQ6DKJ4 435 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 OGFOD3Q6PK18 319 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 ANGPTL8Q6UXH0 198 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 ZNF852Q6ZMS4 543 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 CHST9Q7L1S5 443 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 POLNQ7Z5Q5 900 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 GALNT5Q7Z7M9 940 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 RFX6Q8HWS3 928 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 CCDC50Q8IVM0 306 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 TMEM151BQ8IW70 566 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 PYROXD2Q8N2H3 581 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 ARFGAP1Q8N6T3 406 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 SPERTQ8NA61 448 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 WFIKKN2Q8TEU8 576 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 UCMAQ8WVF2 138 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 RBM41Q96IZ5 413 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 CNDP2Q96KP4 475 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 PRICKLE1Q96MT3 831 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 TSGA13Q96PP4 275 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 PEBP4Q96S96 227 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 PNKPQ96T60 521 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 PRMT1Q99873 361 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 P2RY13Q9BPV8 354 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 CALN1Q9BXU9 219 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 SLC2A11Q9BYW1 496 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 SEMA4AQ9H3S1 761 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 ANLNQ9NQW6 1124 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 ARHGEF4Q9NR80 690 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 ARHGEF3Q9NR81 526 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 HEBP1Q9NRV9 189 aa6.28□□□□□ -1.4
ECHDC1-208ENST00000436638 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms