RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 FBXL22Q6P050 247 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 RNF111Q6ZNA4 994 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 PTAR1Q7Z6K3 402 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 RNF180Q86T96 592 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 SAPCD2Q86UD0 394 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 RNF135Q8IUD6 432 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 ADCY4Q8NFM4 1077 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 RIN3Q8TB24 985 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 SPPL2BQ8TCT7 592 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 HDAC10Q969S8 669 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 MOCOSQ96EN8 888 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 RPRD1AQ96P16 312 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 KLHL5Q96PQ7 755 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 CDK5RAP1Q96SZ6 601 aaKnown RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 NDNQ99608 321 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 MARCH2Q9P0N8 246 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 EPS15L1Q9UBC2 864 aa10.47□□□□□ -0.73
CD44-210ENST00000434472 UXTQ9UBK9 157 aaPredicted RBP10.47□□□□□ -0.73
CD44-210ENST00000434472 TCAF2A6NFQ2 919 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 MOXD2PA6NHM9 499 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 PSMD12O00232 456 aaPredicted RBP10.46□□□□□ -0.74
CD44-210ENST00000434472 AURKAO14965 403 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 RPP40O75818 363 aaKnown RBP10.46□□□□□ -0.74
CD44-210ENST00000434472 FESP07332 822 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 ATXN1LP0C7T5 689 aaKnown RBP10.46□□□□□ -0.74
CD44-210ENST00000434472 CKBP12277 381 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 HNRNPLP14866 589 aaKnown RBP eCLIP10.46□□□□□ -0.74
CD44-210ENST00000434472 FDXRP22570 491 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 PEX2P28328 305 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 GRK4P32298 578 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 TM4SF4P48230 202 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 GPR15P49685 360 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 PGGT1BP53609 377 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 STX1BP61266 288 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 USP46P62068 366 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 CEACAM7Q14002 265 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 ADGRE1Q14246 886 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 GRAMD1BQ3KR37 738 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 MMEL1Q495T6 779 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 ZNF789Q5FWF6 425 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 ZNF678Q5SXM1 525 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 SDHAF4Q5VUM1 108 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 TMEM198Q66K66 360 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 HACD2Q6Y1H2 254 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 RTN4RL1Q86UN2 441 aaPredicted RBP10.46□□□□□ -0.74
CD44-210ENST00000434472 MFN1Q8IWA4 741 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 EFCAB3Q8N7B9 438 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 C2orf15Q8WU43 125 aaKnown RBP10.46□□□□□ -0.74
CD44-210ENST00000434472 IGSF8Q969P0 613 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 CENPKQ9BS16 269 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 SLC25A23Q9BV35 468 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 UNC93B1Q9H1C4 597 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 GSTO2Q9H4Y5 243 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 CYP4F12Q9HCS2 524 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 ACSS2Q9NR19 701 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 TRMT13Q9NUP7 481 aaKnown RBP10.46□□□□□ -0.74
CD44-210ENST00000434472 TMEM161AQ9NX61 479 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.46□□□□□ -0.74
CD44-210ENST00000434472 SARDHQ9UL12 918 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 PRG3Q9Y2Y8 225 aaPredicted RBP10.46□□□□□ -0.74
CD44-210ENST00000434472 TRAF6Q9Y4K3 522 aa10.46□□□□□ -0.74
CD44-210ENST00000434472 NEMP2A6NFY4 417 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 TMEM233B4DJY2 109 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 F5H5T6 163 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 H7C4K7 107 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 CD3EAPO15446 510 aaKnown RBP10.45□□□□□ -0.74
CD44-210ENST00000434472 DENRO43583 198 aaKnown RBP10.45□□□□□ -0.74
CD44-210ENST00000434472 LDB2O43679 373 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 JUNP05412 331 aaKnown RBP10.45□□□□□ -0.74
CD44-210ENST00000434472 SNRPB2P08579 225 aaKnown RBP10.45□□□□□ -0.74
CD44-210ENST00000434472 VCLP18206 1134 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 XRCC1P18887 633 aaPredicted RBP10.45□□□□□ -0.74
CD44-210ENST00000434472 TACR2P21452 398 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 CCND3P30281 292 aaPredicted RBP10.45□□□□□ -0.74
CD44-210ENST00000434472 SUOXP51687 545 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 AQP4P55087 323 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 PSME3P61289 254 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 ELAVL2Q12926 359 aaKnown RBP10.45□□□□□ -0.74
CD44-210ENST00000434472 TRAP1Q12931 704 aaKnown RBP10.45□□□□□ -0.74
CD44-210ENST00000434472 PTK2BQ14289 1009 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 FASTKQ14296 549 aaKnown RBP10.45□□□□□ -0.74
CD44-210ENST00000434472 C5orf22Q49AR2 442 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 CLYBLQ8N0X4 340 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 RHEBL1Q8TAI7 183 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 BRSK1Q8TDC3 778 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 CEP295NLQ96MC4 621 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 SEMA3CQ99985 751 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 MAGEH1Q9H213 219 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 ELAC1Q9H777 363 aaKnown RBP10.45□□□□□ -0.74
CD44-210ENST00000434472 INTS10Q9NVR2 710 aaKnown RBP10.45□□□□□ -0.74
CD44-210ENST00000434472 SUCOQ9UBS9 1254 aaKnown RBP10.45□□□□□ -0.74
CD44-210ENST00000434472 RAB26Q9ULW5 256 aa10.45□□□□□ -0.74
CD44-210ENST00000434472 BBIP1A8MTZ0 92 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 AP1G1O43747 822 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 B4GALT3O60512 393 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 SRP72O76094 671 aaKnown RBP10.44□□□□□ -0.74
CD44-210ENST00000434472 STAMBPO95630 424 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 CRTAMO95727 393 aa10.44□□□□□ -0.74
CD44-210ENST00000434472 NDST3O95803 873 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms