RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 AAMDCQ9H7C9 122 aa2.23□□□□□ -2.05
CDC40-204ENST00000431461 MAP6D1Q9H9H5 199 aa2.23□□□□□ -2.05
CDC40-204ENST00000431461 BPIFA1Q9NP55 256 aa2.23□□□□□ -2.05
CDC40-204ENST00000431461 CD93Q9NPY3 652 aa2.23□□□□□ -2.05
CDC40-204ENST00000431461 PLSCR4Q9NRQ2 329 aa2.23□□□□□ -2.05
CDC40-204ENST00000431461 SNTG1Q9NSN8 517 aa2.23□□□□□ -2.05
CDC40-204ENST00000431461 SIRT3Q9NTG7 399 aaPredicted RBP2.23□□□□□ -2.05
CDC40-204ENST00000431461 C20orf141Q9NUB4 165 aa2.23□□□□□ -2.05
CDC40-204ENST00000431461 GGA3Q9NZ52 723 aa2.23□□□□□ -2.05
CDC40-204ENST00000431461 DLGAP2Q9P1A6 1054 aa2.23□□□□□ -2.05
CDC40-204ENST00000431461 NDRG3Q9UGV2 375 aa2.23□□□□□ -2.05
CDC40-204ENST00000431461 HAO1Q9UJM8 370 aa2.23□□□□□ -2.05
CDC40-204ENST00000431461 FBXO2Q9UK22 296 aaPredicted RBP2.23□□□□□ -2.05
CDC40-204ENST00000431461 MTMR6Q9Y217 621 aa2.23□□□□□ -2.05
CDC40-204ENST00000431461 SLC45A1Q9Y2W3 748 aa2.23□□□□□ -2.05
CDC40-204ENST00000431461 LYVE1Q9Y5Y7 322 aa2.23□□□□□ -2.05
CDC40-204ENST00000431461 TMEM272A0A1B0GTI8 110 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 A0A1W2PQM1 296 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 PABPN1LA6NDY0 278 aaKnown RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 CBY3A6NI87 242 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 AKR1B15C9JRZ8 316 aaPredicted RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 BCAT2O15382 392 aaPredicted RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 TNFSF14O43557 240 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 SPRY3O43610 288 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 TIPRLO75663 272 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 TSPAN9O75954 239 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 ZNF432O94892 652 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 URODP06132 367 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 CHRNB1P11230 501 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 ACADMP11310 421 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 PEPDP12955 493 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 NAGAP17050 411 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 TMEM11P17152 192 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 EPHA8P29322 1005 aaPredicted RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 DCTDP32321 178 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 TTKP33981 857 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 RXRGP48443 463 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 PEX5P50542 639 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 NUDT6P53370 316 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 P2RX3P56373 397 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 GEMIN4P57678 1058 aaKnown RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 OLR1P78380 273 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 RPL36AP83881 106 aaKnown RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 EIF4A2Q14240 407 aaKnown RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 LPIN1Q14693 890 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 PPP2R5BQ15173 497 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 RNPS1Q15287 305 aaKnown RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 SLC4A8Q2Y0W8 1093 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 USP41Q3LFD5 358 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 WASHC2DQ5SRD0 308 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 NAPEPLDQ6IQ20 393 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 PLEKHA7Q6IQ23 1121 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 METTL2BQ6P1Q9 378 aaKnown RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 CACNA2D4Q7Z3S7 1137 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 CPLX4Q7Z7G2 160 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 PCGF5Q86SE9 256 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 GPAT4Q86UL3 456 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 HEATR4Q86WZ0 1026 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 TICAM1Q8IUC6 712 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 CADM3Q8N126 398 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 ZCCHC9Q8N567 271 aaKnown RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 AGBL3Q8NEM8 1001 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 TDRD7Q8NHU6 1098 aaKnown RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 CEP76Q8TAP6 659 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 METTL6Q8TCB7 284 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 FAM216AQ8WUB2 273 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 UCMAQ8WVF2 138 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 DNAAF4Q8WXU2 420 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 ATOH1Q92858 354 aaPredicted RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 SNAPC3Q92966 411 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 ARHGEF2Q92974 986 aaKnown RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 EME1Q96AY2 570 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 MSI2Q96DH6 328 aaKnown RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 RRP36Q96EU6 259 aaKnown RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 MED30Q96HR3 178 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 PGAM5Q96HS1 289 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 METTL2AQ96IZ6 378 aaKnown RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 LRFN5Q96NI6 719 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 BBS4Q96RK4 519 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 EIF2AK1Q9BQI3 630 aaKnown RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 CLSTN3Q9BQT9 956 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 DCLK3Q9C098 648 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 SIL1Q9H173 461 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 MUC13Q9H3R2 512 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 SH2D4AQ9H788 454 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 PLAC1Q9HBJ0 212 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 WDR6Q9NNW5 1121 aaKnown RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 KRT84Q9NSB2 600 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 SMC4Q9NTJ3 1288 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 NSMCE4AQ9NXX6 385 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 HDAC6Q9UBN7 1215 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 LIMA1Q9UHB6 759 aaKnown RBP2.22□□□□□ -2.05
CDC40-204ENST00000431461 COG5Q9UP83 839 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 ERVK-11Q9UQG0 969 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 MMP24Q9Y5R2 645 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 SCINQ9Y6U3 715 aa2.22□□□□□ -2.05
CDC40-204ENST00000431461 DOCK7Q96N67 2140 aa2.21□□□□□ -2.06
CDC40-204ENST00000431461 ATXN2Q99700 1313 aaKnown RBP2.21□□□□□ -2.06
CDC40-204ENST00000431461 A0A0U1RQF3 1178 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms