RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ZNF614Q8N883 585 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 CYB5D2Q8WUJ1 264 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 HEXDCQ8WVB3 486 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 DDX1Q92499 740 aaKnown RBP12.99□□□□□ -0.33
PTCH1-207ENST00000429896 PHF21AQ96BD5 680 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 KLHL32Q96NJ5 620 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 SPHK2Q9NRA0 654 aa12.99□□□□□ -0.33
PTCH1-207ENST00000429896 SLC25A14O95258 325 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-207ENST00000429896 NDST3O95803 873 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 MLLT6P55198 1093 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-207ENST00000429896 BBS7Q8IWZ6 715 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 RIN3Q8TB24 985 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 MCOLN3Q8TDD5 553 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 CXorf40BQ96DE9 158 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 CCDC3Q9BQI4 270 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 CDH7Q9ULB5 785 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 PSMC3P17980 439 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 ATXN7L2Q5T6C5 722 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-207ENST00000429896 FAM151BQ6UXP7 276 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 NDE1Q9NXR1 346 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 MAGEC1O60732 1142 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 LRRC57Q8N9N7 239 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 SGSM3Q96HU1 749 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 CLSTN3Q9BQT9 956 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 UNKQ9C0B0 810 aaKnown RBP12.98□□□□□ -0.33
PTCH1-207ENST00000429896 CRYL1Q9Y2S2 319 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 GUCA1CO95843 209 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 PFKLP17858 780 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 GLRBP48167 497 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 CRADDP78560 199 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 DSC1Q08554 894 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 PCDH19Q8TAB3 1148 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 PCCBP05166 539 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 MC4RP32245 332 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 POTEHQ6S545 545 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 SYTL1Q8IYJ3 562 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 EPS8L3Q8TE67 593 aaKnown RBP12.98□□□□□ -0.33
PTCH1-207ENST00000429896 OTUB1Q96FW1 271 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-207ENST00000429896 SLC2A13Q96QE2 648 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 C8orf33Q9H7E9 229 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-207ENST00000429896 LIMD1Q9UGP4 676 aa12.98□□□□□ -0.33
PTCH1-207ENST00000429896 KRT4P19013 534 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 SH3BGRP55822 239 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-207ENST00000429896 DDX39BQ13838 428 aaKnown RBP12.97□□□□□ -0.33
PTCH1-207ENST00000429896 BMPR2Q13873 1038 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 SLC8B1Q6J4K2 584 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 NMRAL1Q9HBL8 299 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 NMRK1Q9NWW6 199 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 DMGDHQ9UI17 866 aaKnown RBP12.97□□□□□ -0.33
PTCH1-207ENST00000429896 H3BQF6 201 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 RAD51BO15315 384 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 IL10P22301 178 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 PGM1P36871 562 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 CPA2P48052 419 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 RING1Q06587 406 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 LONP2Q86WA8 852 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 HDAC7Q8WUI4 952 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 OSCP1Q8WVF1 389 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 MED8Q96G25 268 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 WRAP53Q9BUR4 548 aaKnown RBP12.97□□□□□ -0.33
PTCH1-207ENST00000429896 SYBUQ9NX95 663 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 NINJ2Q9NZG7 142 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 SPASTQ9UBP0 616 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 ARFGEF1Q9Y6D6 1849 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 WDR47O94967 919 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 ASTE1Q2TB18 679 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-207ENST00000429896 ARMC2Q8NEN0 867 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 MRPL38Q96DV4 380 aaKnown RBP12.97□□□□□ -0.33
PTCH1-207ENST00000429896 OSBPL10Q9BXB5 764 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 GLYATL1P3A0A0U1RQE8 302 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 ZBTB14O43829 449 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 AKT2P31751 481 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 ADAM17P78536 824 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 NTHL1P78549 312 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 CDC16Q13042 620 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 PRR23CQ6ZRP0 262 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 ADCK1Q86TW2 530 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 RASGEF1CQ8N431 466 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 SIPA1Q96FS4 1042 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 PALMDQ9NP74 551 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 RIC8BQ9NVN3 520 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 TCHHQ07283 1943 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 LINC00854A0A1B0GVQ3 168 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 HIDE1A8MVS5 230 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 ERVFC1P60507 584 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 RHBDF2Q6PJF5 856 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 CCDC81Q6ZN84 652 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 SLC43A3Q8NBI5 491 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 OR4L1Q8NH43 312 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 ZNF473Q8WTR7 871 aaKnown RBP12.97□□□□□ -0.33
PTCH1-207ENST00000429896 ZBP1Q9H171 429 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 PIF1Q9H611 641 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 PCDHGC4Q9Y5F7 938 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 SPACA6W5XKT8 324 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 KRT87PA6NCN2 255 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 SSTR1P30872 391 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 CAVIN3Q969G5 261 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 NLNQ9BYT8 704 aa12.97□□□□□ -0.33
PTCH1-207ENST00000429896 COPS7BQ9H9Q2 264 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-207ENST00000429896 PHTF1Q9UMS5 762 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms