RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 MAN1A2O60476 641 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 DGCR6Q14129 220 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 UGT3A1Q6NUS8 523 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 KIAA2013Q8IYS2 634 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 CANT1Q8WVQ1 401 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 GATA6Q92908 595 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 TBATAQ96M53 351 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 PREBQ9HCU5 417 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 MKS1Q9NXB0 559 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 ATP11BQ9Y2G3 1177 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 PTCH2Q9Y6C5 1203 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 PDLIM1O00151 329 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 MYO1DO94832 1006 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 H6PDO95479 791 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 TTKP33981 857 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 CCT8P50990 548 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 LSM3P62310 102 aaKnown RBP12.67□□□□□ -0.38
CPNE4-201ENST00000429747 BNIP2Q12982 314 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 TLR1Q15399 786 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 NFE2Q16621 373 aaPredicted RBP12.67□□□□□ -0.38
CPNE4-201ENST00000429747 PGS1Q32NB8 556 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 CMPK2Q5EBM0 449 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 MFSD14CQ5VZR4 134 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 OR52E8Q6IFG1 317 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 SPESP1Q6UW49 350 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 AHI1Q8N157 1196 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 SFRP1Q8N474 314 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 SENP6Q9GZR1 1112 aaPredicted RBP12.67□□□□□ -0.38
CPNE4-201ENST00000429747 TIMMDC1Q9NPL8 285 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 LEF1Q9UJU2 399 aaPredicted RBP12.67□□□□□ -0.38
CPNE4-201ENST00000429747 PCDHGB4Q9UN71 923 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 DOLKQ9UPQ8 538 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 CAPN14A8MX76 684 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 TREHO43280 583 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 HDCP19113 662 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 CYP3A5P20815 502 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 SLC11A2P49281 568 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 INPP1P49441 399 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 ARHGEF7Q14155 803 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 CCDC142Q17RM4 750 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 CLEC20AQ6ZU45 233 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 ZCCHC7Q8N3Z6 543 aaKnown RBP12.67□□□□□ -0.38
CPNE4-201ENST00000429747 ZMAT2Q96NC0 199 aaKnown RBP12.67□□□□□ -0.38
CPNE4-201ENST00000429747 ACTR8Q9H981 624 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 EXOSC4Q9NPD3 245 aaKnown RBP12.67□□□□□ -0.38
CPNE4-201ENST00000429747 SLC2A6Q9UGQ3 507 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 ARAP2Q8WZ64 1704 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 COL22A1Q8NFW1 1626 aaPredicted RBP12.67□□□□□ -0.38
CPNE4-201ENST00000429747 NRP1O14786 923 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 APOA1P02647 267 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 YWHAQP27348 245 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 PPIL2Q13356 520 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 NOMO2Q5JPE7 1267 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 PERM1Q5SV97 790 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 MILR1Q7Z6M3 343 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 RALGPS2Q86X27 583 aaPredicted RBP12.67□□□□□ -0.38
CPNE4-201ENST00000429747 LGI2Q8N0V4 545 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 CRYBG2Q8N1P7 616 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 ATG16L2Q8NAA4 619 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 BPIFB6Q8NFQ5 453 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 MAPK15Q8TD08 544 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 VPS33AQ96AX1 596 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 DACT3Q96B18 629 aaPredicted RBP12.67□□□□□ -0.38
CPNE4-201ENST00000429747 PPM1MQ96MI6 270 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 HBEGFQ99075 208 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 TXNRD2Q9NNW7 524 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 RBPJLQ9UBG7 517 aa12.67□□□□□ -0.38
CPNE4-201ENST00000429747 CFAP99D6REC4 459 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 SNAP91O60641 907 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 MMP3P08254 477 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 NCK1P16333 377 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 DSC2Q02487 901 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 AARS2Q5JTZ9 985 aaKnown RBP12.66□□□□□ -0.38
CPNE4-201ENST00000429747 C8orf59Q8N0T1 100 aaPredicted RBP12.66□□□□□ -0.38
CPNE4-201ENST00000429747 GPR152Q8TDT2 470 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 TWIST2Q8WVJ9 160 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 FAM124BQ9H5Z6 455 aaPredicted RBP12.66□□□□□ -0.38
CPNE4-201ENST00000429747 PARVBQ9HBI1 364 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 MARCH2Q9P0N8 246 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 SCHIP1Q9P0W5 487 aaPredicted RBP12.66□□□□□ -0.38
CPNE4-201ENST00000429747 CD3EAPO15446 510 aaKnown RBP12.66□□□□□ -0.38
CPNE4-201ENST00000429747 VPS4BO75351 444 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 SEC22BO75396 215 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 RHOCP08134 193 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 S100A5P33763 92 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 IL2P60568 153 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 TNK2Q07912 1038 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 PRKG2Q13237 762 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 DUSP28Q4G0W2 176 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 ZNF280DQ6N043 979 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 PARP8Q8N3A8 854 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 SLC9A7Q96T83 725 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 HOPXQ9BPY8 73 aaPredicted RBP12.66□□□□□ -0.38
CPNE4-201ENST00000429747 RHOBTB2Q9BYZ6 727 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 CXorf21Q9HAI6 301 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 ZBTB26Q9HCK0 441 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 ST3GAL5Q9UNP4 418 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 KIAA1551Q9HCM1 1747 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 LAMB1P07942 1786 aa12.66□□□□□ -0.38
CPNE4-201ENST00000429747 FAM72CH0Y354 149 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms