RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PHC3Q8NDX5 983 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 ZSCAN18Q8TBC5 510 aaPredicted RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 TRPC4APQ8TEL6 797 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 NDRG1Q92597 394 aaKnown RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 FATE1Q969F0 183 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 ASB9Q96DX5 294 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 ATXN7L3BQ96GX2 97 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 RANBP9Q96S59 729 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 SMOQ99835 787 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 DDX50Q9BQ39 737 aaKnown RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 TSEN34Q9BSV6 310 aaKnown RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 HAUS8Q9BT25 410 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 EFHD1Q9BUP0 239 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 TMUB1Q9BVT8 246 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 TKTL2Q9H0I9 626 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 CAB39LQ9H9S4 337 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 PIDD1Q9HB75 910 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 CRTAC1Q9NQ79 661 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 ARHGEF38Q9NXL2 777 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 PTTG2Q9NZH5 202 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 KLK14Q9P0G3 267 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 IPO11Q9UI26 975 aaKnown RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 ZDHHC2Q9UIJ5 367 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 DSEQ9UL01 958 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 TCAF1Q9Y4C2 921 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 C15orf38-AP3S2A0A0A6YYH1 394 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 C17orf102A2RUQ5 167 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 DNAJA2O60884 412 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 USP12O75317 370 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 UPP2O95045 317 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 PAPSS2O95340 614 aaPredicted RBP8.75□□□□□ -1.01
GABPB1-205ENST00000429662 CLPTM1O96005 669 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 CHRNGP07510 517 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 SBK3P0C264 359 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 USP17L7P0C7H9 530 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 FAM58BPP0C7Q3 252 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 CST5P28325 142 aaPredicted RBP8.75□□□□□ -1.01
GABPB1-205ENST00000429662 EPHA3P29320 983 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 ARCN1P48444 511 aaKnown RBP8.75□□□□□ -1.01
GABPB1-205ENST00000429662 CPT1AP50416 773 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 THOP1P52888 689 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 INHBCP55103 352 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 NAA20P61599 178 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 TMEM62Q0P6H9 643 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 SKIV2LQ15477 1246 aaKnown RBP8.75□□□□□ -1.01
GABPB1-205ENST00000429662 DLG2Q15700 870 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 LRRC36Q1X8D7 754 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 TMEM259Q4ZIN3 620 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 FAM182AQ5T1J6 154 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 TAF2Q6P1X5 1199 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 OTOP2Q7RTS6 562 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 ARPINQ7Z6K5 226 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 LSMEM2Q8N112 164 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 KDM1BQ8NB78 822 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 SLC43A3Q8NBI5 491 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 GOLM1Q8NBJ4 401 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 HIPK4Q8NE63 616 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 KCTD4Q8WVF5 259 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 DNAJB3Q8WWF6 145 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 RNF34Q969K3 372 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 RCN3Q96D15 328 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 GPR78Q96P69 363 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 ACBD6Q9BR61 282 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 FTHL17Q9BXU8 183 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 OXCT2Q9BYC2 517 aaPredicted RBP8.75□□□□□ -1.01
GABPB1-205ENST00000429662 NUF2Q9BZD4 464 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 SHCBP1LQ9BZQ2 653 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 WDR55Q9H6Y2 383 aaPredicted RBP8.75□□□□□ -1.01
GABPB1-205ENST00000429662 MEAF6Q9HAF1 191 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 ARNT2Q9HBZ2 717 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 STARD7Q9NQZ5 370 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 C8orf4Q9NR00 106 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 TMPRSS4Q9NRS4 437 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 ETAA1Q9NY74 926 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 XPR1Q9UBH6 696 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 RIMS3Q9UJD0 308 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 GIT1Q9Y2X7 761 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 COPG1Q9Y678 874 aaKnown RBP8.75□□□□□ -1.01
GABPB1-205ENST00000429662 CACNA1GO43497 2377 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 SCN1AP35498 2009 aa8.75□□□□□ -1.01
GABPB1-205ENST00000429662 HEATR9A2RTY3 570 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 KLHL33A6NCF5 533 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 CAPN8A6NHC0 703 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 BBIP1A8MTZ0 92 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 WASH4PA8MWX3 477 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 HHLA1C9JL84 531 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 M0QZ92 97 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 SDHDO14521 159 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 NEMP1O14524 444 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 PTGESO14684 152 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 ACOT8O14734 319 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 CFLARO15519 480 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 PHGDHO43175 533 aaKnown RBP8.74□□□□□ -1.01
GABPB1-205ENST00000429662 DYNC1LI2O43237 492 aaPredicted RBP8.74□□□□□ -1.01
GABPB1-205ENST00000429662 KPNA6O60684 536 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 GPC4O75487 556 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 ZMPSTE24O75844 475 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 CRTAMO95727 393 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 THP07101 528 aa8.74□□□□□ -1.01
GABPB1-205ENST00000429662 C8BP07358 591 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms