RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 Q8N9G6 341 aaPredicted RBP13.2□□□□□ -0.3
HLA-F-219ENST00000429294 C3orf20Q8ND61 904 aa13.2□□□□□ -0.3
HLA-F-219ENST00000429294 VOPP1Q96AW1 172 aa13.2□□□□□ -0.3
HLA-F-219ENST00000429294 CLSTN2Q9H4D0 955 aa13.2□□□□□ -0.3
HLA-F-219ENST00000429294 ATP13A3Q9H7F0 1226 aa13.2□□□□□ -0.3
HLA-F-219ENST00000429294 NLRC4Q9NPP4 1024 aa13.2□□□□□ -0.3
HLA-F-219ENST00000429294 TAB2Q9NYJ8 693 aa13.2□□□□□ -0.3
HLA-F-219ENST00000429294 LHX3Q9UBR4 397 aa13.2□□□□□ -0.3
HLA-F-219ENST00000429294 APPL1Q9UKG1 709 aa13.2□□□□□ -0.3
HLA-F-219ENST00000429294 TSPAN11A1L157 253 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 ARHGAP42A6NI28 874 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 WASH4PA8MWX3 477 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 TNFRSF10CO14798 259 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 EFSO43281 561 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 ELFN1P0C7U0 828 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 UNGP13051 313 aaPredicted RBP13.19□□□□□ -0.3
HLA-F-219ENST00000429294 MMP12P39900 470 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 ZNF143P52747 638 aaPredicted RBP13.19□□□□□ -0.3
HLA-F-219ENST00000429294 NDST2P52849 883 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 TPI1P60174 286 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 CYTH1Q15438 398 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 TSR1Q2NL82 804 aaKnown RBP13.19□□□□□ -0.3
HLA-F-219ENST00000429294 CERCAMQ5T4B2 595 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 DCUN1D2Q6PH85 259 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 PHF13Q86YI8 300 aaPredicted RBP13.19□□□□□ -0.3
HLA-F-219ENST00000429294 GPR156Q8NFN8 814 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 OR56A4Q8NGH8 313 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 KIAA1524Q8TCG1 905 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 PCMTD1Q96MG8 357 aaPredicted RBP13.19□□□□□ -0.3
HLA-F-219ENST00000429294 KLC2Q9H0B6 622 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 NUP62CLQ9H1M0 184 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 VPS16Q9H269 839 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 GANQ9H2C0 597 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 DPEP2Q9H4A9 486 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 MOSPD1Q9UJG1 213 aa13.19□□□□□ -0.3
HLA-F-219ENST00000429294 PTPN13Q12923 2485 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 CCP110O43303 1012 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 PALMO75781 387 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 RECQL5O94762 991 aaPredicted RBP13.18□□□□□ -0.3
HLA-F-219ENST00000429294 NFKBIAP25963 317 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 CD82P27701 267 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 CSNK1DP48730 415 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 CSRP3P50461 194 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 MAPK10P53779 464 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 JAM2P57087 298 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 KIAA1024LP59773 190 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
HLA-F-219ENST00000429294 BCL2L1Q07817 233 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 BIRC2Q13490 618 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 TGIF1Q15583 401 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 CLEC16AQ2KHT3 1053 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 MAP9Q49MG5 647 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 C14orf28Q4W4Y0 310 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 PHF19Q5T6S3 580 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 OGFOD3Q6PK18 319 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 SRLQ86TD4 932 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 CAMK1DQ8IU85 385 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 ANKRD20A12PQ8NF67 263 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 PDXPQ96GD0 296 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 CNPY3Q9BT09 278 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 LRIT1Q9P2V4 623 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 FZD10Q9ULW2 581 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 RNF215Q9Y6U7 377 aa13.18□□□□□ -0.3
HLA-F-219ENST00000429294 ARHGEF17Q96PE2 2063 aaPredicted RBP13.17□□□□□ -0.3
HLA-F-219ENST00000429294 A0A1W2PQC6 194 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 B4DGG1 531 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 EIF3CLB5ME19 914 aaKnown RBP13.17□□□□□ -0.3
HLA-F-219ENST00000429294 PYCARD-AS1I3L0S3 204 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 ARHGAP6O43182 974 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 DAPK3O43293 454 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 NUDT21O43809 227 aaKnown RBP13.17□□□□□ -0.3
HLA-F-219ENST00000429294 NOBOXO60393 691 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 PRAMEF11O60813 436 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 HOXC4P09017 264 aaPredicted RBP13.17□□□□□ -0.3
HLA-F-219ENST00000429294 CCDC172P0C7W6 258 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 ZFP36L1Q07352 338 aaKnown RBP13.17□□□□□ -0.3
HLA-F-219ENST00000429294 PTP4A2Q12974 167 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 PEX6Q13608 980 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 ATG14Q6ZNE5 492 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 SPRED1Q7Z699 444 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 PIM3Q86V86 326 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 EXD3Q8N9H8 876 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 NEK11Q8NG66 645 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 OR1E3Q8WZA6 343 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 EXTL1Q92935 676 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 FUBP1Q96AE4 644 aaKnown RBP13.17□□□□□ -0.3
HLA-F-219ENST00000429294 MCEEQ96PE7 176 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 PCDHB18PQ96TA0 734 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 EIF3CQ99613 913 aaKnown RBP13.17□□□□□ -0.3
HLA-F-219ENST00000429294 CINPQ9BW66 212 aaPredicted RBP13.17□□□□□ -0.3
HLA-F-219ENST00000429294 WDR26Q9H7D7 661 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 SP110Q9HB58 689 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 CYP4F12Q9HCS2 524 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 KCTD5Q9NXV2 234 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 LRRK1Q38SD2 2015 aa13.17□□□□□ -0.3
HLA-F-219ENST00000429294 PRAMEF33A0A0G2JMD5 474 aa13.16□□□□□ -0.3
HLA-F-219ENST00000429294 TMEM202A6NGA9 273 aa13.16□□□□□ -0.3
HLA-F-219ENST00000429294 RHPN2P1A8MT19 583 aa13.16□□□□□ -0.3
HLA-F-219ENST00000429294 J3KR12 359 aa13.16□□□□□ -0.3
HLA-F-219ENST00000429294 AGRPO00253 132 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms