RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 LRIT1Q9P2V4 623 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 NOCTQ9UK39 431 aaKnown RBP18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 ATP8A1Q9Y2Q0 1164 aa18.43■□□□□ 0.54
UPK3BP1-201ENST00000428678 A0A1W2PQC6 194 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 TSPAN11A1L157 253 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 TMEM202A6NGA9 273 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 C9orf172C9J069 976 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 CACNB4O00305 520 aaPredicted RBP18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 GFPT2O94808 682 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 PNLIPP16233 465 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 WT1P19544 449 aaPredicted RBP18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 YBEYP58557 167 aaPredicted RBP18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 SERINC3Q13530 473 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 GRM3Q14832 879 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 AGERQ15109 404 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 CYTH1Q15438 398 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 PARP15Q460N3 678 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 EFHC2Q5JST6 749 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 BRAT1Q6PJG6 821 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 OGFOD3Q6PK18 319 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 TMPRSS9Q7Z410 1059 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 SLFN11Q7Z7L1 901 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 ZNF677Q86XU0 584 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 SLITRK4Q8IW52 837 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 HCAR2Q8TDS4 363 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 SEMA3CQ99985 751 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 SEMA6CQ9H3T2 930 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 DPEP2Q9H4A9 486 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 FGF22Q9HCT0 170 aa18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 MRPL40Q9NQ50 206 aaKnown RBP18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 UBA2Q9UBT2 640 aaPredicted RBP18.42■□□□□ 0.54
UPK3BP1-201ENST00000428678 CREB3O43889 395 aa18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 PPFIA2O75334 1257 aa18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 CYP1A1P04798 512 aaPredicted RBP18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 KRT3P12035 628 aa18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 KIAA1024LP59773 190 aa18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 FMO1Q01740 532 aa18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 CDR2Q01850 454 aa18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 SPECC1LQ69YQ0 1117 aa18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 SCYL2Q6P3W7 929 aa18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 DTX1Q86Y01 620 aa18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 CAMK1DQ8IU85 385 aa18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 PAF1Q8N7H5 531 aa18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 HTR3CQ8WXA8 447 aa18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 JPH3Q8WXH2 748 aaPredicted RBP18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 FUBP1Q96AE4 644 aaKnown RBP18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 ZNF641Q96N77 438 aaPredicted RBP18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 TMEM168Q9H0V1 697 aa18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 AKAP7Q9P0M2 348 aaPredicted RBP18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 MOSPD1Q9UJG1 213 aa18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 SDK2Q58EX2 2172 aa18.41■□□□□ 0.54
UPK3BP1-201ENST00000428678 BUB1BO60566 1050 aaPredicted RBP18.4■□□□□ 0.54
UPK3BP1-201ENST00000428678 GPD1P21695 349 aa18.4■□□□□ 0.54
UPK3BP1-201ENST00000428678 KELP23276 732 aa18.4■□□□□ 0.54
UPK3BP1-201ENST00000428678 CD82P27701 267 aa18.4■□□□□ 0.54
UPK3BP1-201ENST00000428678 RFC1P35251 1148 aaPredicted RBP18.4■□□□□ 0.54
UPK3BP1-201ENST00000428678 HLTFQ14527 1009 aaKnown RBP eCLIP18.4■□□□□ 0.54
UPK3BP1-201ENST00000428678 C16orf72Q14CZ0 275 aa18.4■□□□□ 0.54
UPK3BP1-201ENST00000428678 AMZ1Q400G9 498 aa18.4■□□□□ 0.54
UPK3BP1-201ENST00000428678 COLEC12Q5KU26 742 aa18.4■□□□□ 0.54
UPK3BP1-201ENST00000428678 TMEM164Q5U3C3 297 aa18.4■□□□□ 0.54
UPK3BP1-201ENST00000428678 ZSWIM9Q86XI8 627 aa18.4■□□□□ 0.54
UPK3BP1-201ENST00000428678 SELENOOQ9BVL4 669 aa18.4■□□□□ 0.54
UPK3BP1-201ENST00000428678 CATSPERBQ9H7T0 1116 aa18.4■□□□□ 0.54
UPK3BP1-201ENST00000428678 RDH14Q9HBH5 336 aa18.4■□□□□ 0.54
UPK3BP1-201ENST00000428678 CYP4F12Q9HCS2 524 aa18.4■□□□□ 0.54
UPK3BP1-201ENST00000428678 NUDT21O43809 227 aaKnown RBP18.39■□□□□ 0.53
UPK3BP1-201ENST00000428678 RECQL5O94762 991 aaPredicted RBP18.39■□□□□ 0.53
UPK3BP1-201ENST00000428678 ELFN1P0C7U0 828 aa18.39■□□□□ 0.53
UPK3BP1-201ENST00000428678 CHRNB2P17787 502 aa18.39■□□□□ 0.53
UPK3BP1-201ENST00000428678 CLCA4Q14CN2 919 aa18.39■□□□□ 0.53
UPK3BP1-201ENST00000428678 ZNF574Q6ZN55 896 aaPredicted RBP18.39■□□□□ 0.53
UPK3BP1-201ENST00000428678 PIM3Q86V86 326 aa18.39■□□□□ 0.53
UPK3BP1-201ENST00000428678 UMODL1-AS1Q8N2C9 162 aa18.39■□□□□ 0.53
UPK3BP1-201ENST00000428678 CCL4L1Q8NHW4 92 aa18.39■□□□□ 0.53
UPK3BP1-201ENST00000428678 KIAA1524Q8TCG1 905 aa18.39■□□□□ 0.53
UPK3BP1-201ENST00000428678 TUBGCP5Q96RT8 1024 aa18.39■□□□□ 0.53
UPK3BP1-201ENST00000428678 FUCA2Q9BTY2 467 aa18.39■□□□□ 0.53
UPK3BP1-201ENST00000428678 SLC25A18Q9H1K4 315 aa18.39■□□□□ 0.53
UPK3BP1-201ENST00000428678 ATP13A3Q9H7F0 1226 aa18.39■□□□□ 0.53
UPK3BP1-201ENST00000428678 SUDS3Q9H7L9 328 aaPredicted RBP18.39■□□□□ 0.53
UPK3BP1-201ENST00000428678 STMND1H3BQB6 276 aa18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 J3KR12 359 aa18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 TNFRSF10CO14798 259 aa18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 CPNE6O95741 557 aa18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 CCL4P13236 92 aa18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 SERPINA4P29622 427 aa18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 NSFP46459 744 aaKnown RBP18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 MAZP56270 477 aaKnown RBP18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 B4GALNT1Q00973 533 aa18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 TLE1Q04724 770 aa18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 SRSF1Q07955 248 aaKnown RBP eCLIP18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 WDR59Q6PJI9 974 aa18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 TRIM72Q6ZMU5 477 aa18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 WDR26Q9H7D7 661 aa18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 PDFQ9HBH1 243 aa18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 GEMIN8Q9NWZ8 242 aaKnown RBP18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 ADAM22Q9P0K1 906 aa18.38■□□□□ 0.53
UPK3BP1-201ENST00000428678 CFAP69A5D8W1 941 aa18.37■□□□□ 0.53
UPK3BP1-201ENST00000428678 RHPN2P1A8MT19 583 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms