RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-215ENST00000427487 CCR3P51677 355 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 PTPN5P54829 565 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 CREB5Q02930 508 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 GAS6Q14393 721 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 SPARCL1Q14515 664 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 TAF1AQ15573 450 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-215ENST00000427487 CCDC38Q502W7 563 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 CWF19L1Q69YN2 538 aaKnown RBP12.11□□□□□ -0.47
HDLBP-215ENST00000427487 KIAA1211LQ6NV74 962 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 ERAP2Q6P179 960 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 NEK5Q6P3R8 708 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 TMEM92Q6UXU6 159 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 TMEM135Q86UB9 458 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 RASSF3Q86WH2 238 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 TAB3Q8N5C8 712 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-215ENST00000427487 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.11□□□□□ -0.47
HDLBP-215ENST00000427487 LPCAT1Q8NF37 534 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 AENQ8WTP8 325 aaKnown RBP12.11□□□□□ -0.47
HDLBP-215ENST00000427487 SCG3Q8WXD2 468 aaKnown RBP12.11□□□□□ -0.47
HDLBP-215ENST00000427487 SIPA1Q96FS4 1042 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 SGSM3Q96HU1 749 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 MRGPRX1Q96LB2 322 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 NECAB3Q96P71 396 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-215ENST00000427487 EBNA1BP2Q99848 306 aaKnown RBP12.11□□□□□ -0.47
HDLBP-215ENST00000427487 TXLNGYQ9BZA5 131 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 NEUROG2Q9H2A3 272 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 MTG2Q9H4K7 406 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 RAD18Q9NS91 495 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.11□□□□□ -0.473e-6■■■□□ 15.8
HDLBP-215ENST00000427487 NFKBIL1Q9UBC1 381 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-215ENST00000427487 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.11□□□□□ -0.47
HDLBP-215ENST00000427487 SOX13Q9UN79 622 aa12.11□□□□□ -0.47
HDLBP-215ENST00000427487 V9GYY5 206 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-215ENST00000427487 ANTXRLA6NF34 631 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 TMEM221A6NGB7 291 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 C2orf81A6NN90 581 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 F5H423 210 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-215ENST00000427487 M0R296 226 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 TSPAN6O43657 245 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 USP12O75317 370 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 ZNF217O75362 1048 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 USP1O94782 785 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 COL9A1P20849 921 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 XPAP23025 273 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-215ENST00000427487 DRD3P35462 400 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 MMP12P39900 470 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 WASP42768 502 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 ACVR1Q04771 509 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 DHX9Q08211 1270 aaKnown RBP12.1□□□□□ -0.47
HDLBP-215ENST00000427487 CDKN3Q16667 212 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 SKIDA1Q1XH10 827 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 TMEM52BQ4KMG9 183 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 FNBP1LQ5T0N5 605 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 PKN3Q6P5Z2 889 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 FBXL19Q6PCT2 694 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 Q6ZS52 159 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 TRMT10CQ7L0Y3 403 aaKnown RBP12.1□□□□□ -0.47
HDLBP-215ENST00000427487 DPPA4Q7L190 304 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 PARS2Q7L3T8 475 aaKnown RBP12.1□□□□□ -0.47
HDLBP-215ENST00000427487 TTC7BQ86TV6 843 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 NLRP8Q86W28 1048 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 ZSWIM9Q86XI8 627 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 CBARPQ8N350 705 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-215ENST00000427487 MREGQ8N565 214 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 PPHLN1Q8NEY8 458 aaKnown RBP12.1□□□□□ -0.47
HDLBP-215ENST00000427487 STYXQ8WUJ0 223 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 PDCD6IPQ8WUM4 868 aaKnown RBP12.1□□□□□ -0.47
HDLBP-215ENST00000427487 ARRDC3Q96B67 414 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 PKNOX2Q96KN3 472 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 FUT8Q9BYC5 575 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 EPC1Q9H2F5 836 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 ARGLU1Q9NWB6 273 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-215ENST00000427487 SAMD15Q9P1V8 674 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 USP36Q9P275 1121 aaKnown RBP12.1□□□□□ -0.47
HDLBP-215ENST00000427487 NCKAP1Q9Y2A7 1128 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 TCAF1Q9Y4C2 921 aa12.1□□□□□ -0.47
HDLBP-215ENST00000427487 TRIOO75962 3097 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 GOLGA8MH3BSY2 632 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 H7C0S8 307 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 STK25O00506 426 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 MID1O15344 667 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 LDB2O43679 373 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 APBB3O95704 486 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 POLBP06746 335 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 MYBL2P10244 700 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 ACADMP11310 421 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 GABRG2P18507 467 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 PGAM1P18669 254 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 NDUFV2P19404 249 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 LPOP22079 712 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-215ENST00000427487 OXTRP30559 389 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 VIPR1P32241 457 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 HNF1BP35680 557 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 HADHAP40939 763 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 P2RY2P41231 377 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 MAGEA4P43358 317 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 CHRNA4P43681 627 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 PSMD8P48556 350 aa12.09□□□□□ -0.47
HDLBP-215ENST00000427487 SESN2P58004 480 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-215ENST00000427487 ILF2Q12905 390 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms