RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 TMEM116Q8NCL8 245 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 B4GALNT2Q8NHY0 566 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 GPT2Q8TD30 523 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 OIT3Q8WWZ8 545 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 PSPC1Q8WXF1 523 aaKnown RBP2.53□□□□□ -2
PTPRC-208ENST00000427110 INPP5DQ92835 1189 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 FBXL8Q96CD0 374 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 PABPC5Q96DU9 382 aaKnown RBP2.53□□□□□ -2
PTPRC-208ENST00000427110 PERPQ96FX8 193 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 ZNF570Q96NI8 536 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 GLIS2Q9BZE0 524 aaPredicted RBP2.53□□□□□ -2
PTPRC-208ENST00000427110 FTOQ9C0B1 505 aaKnown RBP eCLIP2.53□□□□□ -2
PTPRC-208ENST00000427110 RBM38Q9H0Z9 239 aaKnown RBP2.53□□□□□ -2
PTPRC-208ENST00000427110 SH2D4AQ9H788 454 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 KIF9Q9HAQ2 790 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 RRP7BPQ9NSQ0 103 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 TBC1D22BQ9NU19 505 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 SEPT11Q9NVA2 429 aaKnown RBP2.53□□□□□ -2
PTPRC-208ENST00000427110 HAUS2Q9NVX0 235 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 ANKRD10Q9NXR5 420 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 CISD1Q9NZ45 108 aaKnown RBP2.53□□□□□ -2
PTPRC-208ENST00000427110 EHD2Q9NZN4 543 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 DLGAP2Q9P1A6 1054 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 FBXO9Q9UK97 447 aaPredicted RBP2.53□□□□□ -2
PTPRC-208ENST00000427110 CORO1CQ9ULV4 474 aaPredicted RBP2.53□□□□□ -2
PTPRC-208ENST00000427110 FZD10Q9ULW2 581 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 PAM16Q9Y3D7 125 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 CAPN7Q9Y6W3 813 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 PIAS3Q9Y6X2 628 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 A3GALT2U3KPV4 340 aa2.53□□□□□ -2
PTPRC-208ENST00000427110 CNTNAP2Q9UHC6 1331 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 A0A0U1RQF3 1178 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 A0A1W2PQM1 296 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 FAM90A8PA6NJQ4 464 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 BECN2A8MW95 431 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 ASAP2O43150 1006 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 SEC14L5O43304 696 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 LDB2O43679 373 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 EIF2S1P05198 315 aaKnown RBP2.52□□□□□ -2.01
PTPRC-208ENST00000427110 HOXB5P09067 269 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 FAM90A13PP0C7W8 464 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 FAM90A24PP0C7X0 464 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 LAMP2P13473 410 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 IL7RP16871 459 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 ITGAXP20702 1163 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 ARRB2P32121 409 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 CDAP32320 146 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 THPOP40225 353 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 MLH1P40692 756 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 PIK3CAP42336 1068 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 CXCR3P49682 368 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 RASSF2P50749 326 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 CEBPZQ03701 1054 aaKnown RBP2.52□□□□□ -2.01
PTPRC-208ENST00000427110 NEDD9Q14511 834 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 FGFBP1Q14512 234 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 DUSP6Q16828 381 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 SOWAHAQ2M3V2 549 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 FSCBQ5H9T9 825 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 DNTTIP2Q5QJE6 756 aaKnown RBP2.52□□□□□ -2.01
PTPRC-208ENST00000427110 FNBP1LQ5T0N5 605 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 SNX30Q5VWJ9 437 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 MZT2BQ6NZ67 158 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 TMEM154Q6P9G4 183 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 FBXO46Q6PJ61 603 aaPredicted RBP2.52□□□□□ -2.01
PTPRC-208ENST00000427110 TMED8Q6PL24 325 aaPredicted RBP2.52□□□□□ -2.01
PTPRC-208ENST00000427110 CYP20A1Q6UW02 462 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 NEK10Q6ZWH5 1172 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 TRILQ7L0X0 811 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 FASTKD5Q7L8L6 764 aaKnown RBP2.52□□□□□ -2.01
PTPRC-208ENST00000427110 ZNF367Q7RTV3 350 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 PATL1Q86TB9 770 aaKnown RBP2.52□□□□□ -2.01
PTPRC-208ENST00000427110 SLC35F3Q8IY50 421 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 CCDC13Q8IYE1 715 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 ZBTB2Q8N680 514 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 SCCPDHQ8NBX0 429 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 BEST2Q8NFU1 509 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 HUS1BQ8NHY5 278 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 SCFD2Q8WU76 684 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 POMGNT1Q8WZA1 660 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 ARHGEF2Q92974 986 aaKnown RBP2.52□□□□□ -2.01
PTPRC-208ENST00000427110 MMABQ96EY8 250 aaPredicted RBP2.52□□□□□ -2.01
PTPRC-208ENST00000427110 THOC3Q96J01 351 aaKnown RBP2.52□□□□□ -2.01
PTPRC-208ENST00000427110 ZNF479Q96JC4 524 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 LYZL4Q96KX0 146 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 WDFY2Q96P53 400 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 ZPBPQ9BS86 351 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 ITPAQ9BY32 194 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 KAT14Q9H8E8 782 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 SCPEP1Q9HB40 452 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 PLAC1Q9HBJ0 212 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 GPR108Q9NPR9 543 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 ASAH2Q9NR71 780 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 CYSLTR2Q9NS75 346 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 TMEM51Q9NW97 253 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 PLK2Q9NYY3 685 aa2.52□□□□□ -2.01
PTPRC-208ENST00000427110 LSM4Q9Y4Z0 139 aaKnown RBP2.52□□□□□ -2.01
PTPRC-208ENST00000427110 PRSS47A8MTI9 375 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 LACTBL1A8MY62 500 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 MYO1GB0I1T2 1018 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 AKR1B15C9JRZ8 316 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms