RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 SLC43A3Q8NBI5 491 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 ATAD1Q8NBU5 361 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 TNFRSF12AQ9NP84 129 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 PSMD13Q9UNM6 376 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 SDK1Q7Z5N4 2213 aa13.45□□□□□ -0.26
USP42-203ENST00000426246 LIN7AO14910 233 aaPredicted RBP13.44□□□□□ -0.26
USP42-203ENST00000426246 GUCA1CO95843 209 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 HLA-DQB2P05538 268 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 FMO4P31512 558 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 LPIN1Q14693 890 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 TAS2R42Q7RTR8 314 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 CUZD1Q86UP6 607 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 RALGPS2Q86X27 583 aaPredicted RBP13.44□□□□□ -0.26
USP42-203ENST00000426246 AFAP1L2Q8N4X5 818 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 NPY6RQ99463 290 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 RGS18Q9NS28 235 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 TDRD15B5MCY1 1934 aaKnown RBP13.44□□□□□ -0.26
USP42-203ENST00000426246 SF3B1O75533 1304 aaKnown RBP eCLIP13.44□□□□□ -0.261e-7■■■■■ 74.2
USP42-203ENST00000426246 SLC10A7Q0GE19 358 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 TSTA3Q13630 321 aaPredicted RBP13.44□□□□□ -0.26
USP42-203ENST00000426246 COL9A2Q14055 689 aaPredicted RBP13.44□□□□□ -0.26
USP42-203ENST00000426246 RBBP7Q16576 425 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 PAQR9Q6ZVX9 377 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 MRPL10Q7Z7H8 261 aaKnown RBP13.44□□□□□ -0.26
USP42-203ENST00000426246 PTGR2Q8N8N7 351 aaPredicted RBP13.44□□□□□ -0.26
USP42-203ENST00000426246 PCSK9Q8NBP7 692 aaKnown RBP13.44□□□□□ -0.26
USP42-203ENST00000426246 SH3RF2Q8TEC5 729 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 CANT1Q8WVQ1 401 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 CDK15Q96Q40 435 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 ETAA1Q9NY74 926 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 UXTQ9UBK9 157 aaPredicted RBP13.44□□□□□ -0.26
USP42-203ENST00000426246 WARS2Q9UGM6 360 aaKnown RBP13.44□□□□□ -0.26
USP42-203ENST00000426246 HACD1B0YJ81 288 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 GPR39O43194 453 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 MPOP05164 745 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 FYNP06241 537 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 TFPTP0C1Z6 253 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 PAMP19021 973 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 CRABP2P29373 138 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 GSSP48637 474 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 C1QTNF8P60827 252 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 C10orf120Q5SQS8 335 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 AGMOQ6ZNB7 445 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 ZDHHC17Q8IUH5 632 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 MFN1Q8IWA4 741 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 OR6K2Q8NGY2 324 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 MAGEE2Q8TD90 523 aaPredicted RBP13.44□□□□□ -0.26
USP42-203ENST00000426246 ACMSDQ8TDX5 336 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 TEKT5Q96M29 485 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 ACOX2Q99424 681 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 HAUS8Q9BT25 410 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 RHOJQ9H4E5 214 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 PREBQ9HCU5 417 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 PADI3Q9ULW8 664 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 DOLKQ9UPQ8 538 aa13.44□□□□□ -0.26
USP42-203ENST00000426246 UBXN8O00124 270 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 MATN2O00339 956 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 SRP72O76094 671 aaKnown RBP13.43□□□□□ -0.26
USP42-203ENST00000426246 CNTN5O94779 1100 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 GNRH1P01148 92 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 MGAT5BQ3V5L5 792 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 TTC33Q6PID6 262 aaPredicted RBP13.43□□□□□ -0.26
USP42-203ENST00000426246 ARHGAP22Q7Z5H3 698 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 CPNE9Q8IYJ1 553 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 GIPC2Q8TF65 315 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 ANKRD49Q8WVL7 239 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 RTKNQ9BST9 563 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 TMLHEQ9NVH6 421 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 DPYSL4O14531 572 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 DAB1O75553 588 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 INHAP05111 366 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 ZNF23P17027 643 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 MTTPP55157 894 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 C16orf72Q14CZ0 275 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 LDLRAP1Q5SW96 308 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 OVOS1Q6IE37 1185 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 LPCAT2Q7L5N7 544 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 CENPLQ8N0S6 344 aaPredicted RBP13.43□□□□□ -0.26
USP42-203ENST00000426246 OR13C4Q8NGS5 318 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 ZNF296Q8WUU4 475 aaPredicted RBP13.43□□□□□ -0.26
USP42-203ENST00000426246 PSMG2Q969U7 264 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 ANKRD27Q96NW4 1050 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 NR1H4Q96RI1 486 aaPredicted RBP13.43□□□□□ -0.26
USP42-203ENST00000426246 TBCDQ9BTW9 1192 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 GBA3Q9H227 469 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 DNAJC28Q9NX36 388 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 HACD3Q9P035 362 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 STK39Q9UEW8 545 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 ARL5AQ9Y689 179 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 HEATR9A2RTY3 570 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 GRID2O43424 1007 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 RPLP2P05387 115 aaKnown RBP13.43□□□□□ -0.26
USP42-203ENST00000426246 HADHAP40939 763 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 ZNF235Q14590 738 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 MBTPS1Q14703 1052 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 JADE3Q92613 823 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 CASP10Q92851 521 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 OLFM1Q99784 485 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 SLC29A1Q99808 456 aa13.43□□□□□ -0.26
USP42-203ENST00000426246 SMPD4Q9NXE4 827 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms