RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 TRBC1P01850 177 aa24.59■■□□□ 1.53
VEGFA-209ENST00000425836 ALPIP09923 528 aa24.59■■□□□ 1.53
VEGFA-209ENST00000425836 HNF1BP35680 557 aa24.59■■□□□ 1.53
VEGFA-209ENST00000425836 GEMP55040 296 aa24.59■■□□□ 1.53
VEGFA-209ENST00000425836 FGL2Q14314 439 aa24.59■■□□□ 1.53
VEGFA-209ENST00000425836 GALNT3Q14435 633 aa24.59■■□□□ 1.53
VEGFA-209ENST00000425836 USP45Q70EL2 814 aa24.59■■□□□ 1.53
VEGFA-209ENST00000425836 KLHDC8BQ8IXV7 354 aa24.59■■□□□ 1.53
VEGFA-209ENST00000425836 CCDC89Q8N998 374 aa24.59■■□□□ 1.53
VEGFA-209ENST00000425836 IPMKQ8NFU5 416 aa24.59■■□□□ 1.53
VEGFA-209ENST00000425836 ATL2Q8NHH9 583 aa24.59■■□□□ 1.53
VEGFA-209ENST00000425836 C1QTNF2Q9BXJ5 285 aa24.59■■□□□ 1.53
VEGFA-209ENST00000425836 MIR1-1HGQ9H1L0 117 aa24.59■■□□□ 1.53
VEGFA-209ENST00000425836 AAR2Q9Y312 384 aaKnown RBP24.59■■□□□ 1.53
VEGFA-209ENST00000425836 GOLGA6L10A0A0M3HER8 536 aa24.58■■□□□ 1.52
VEGFA-209ENST00000425836 NPIPB15A6NHN6 443 aaPredicted RBP24.58■■□□□ 1.52
VEGFA-209ENST00000425836 ANKRD66B4E2M5 251 aa24.58■■□□□ 1.52
VEGFA-209ENST00000425836 PDE2AO00408 941 aaPredicted RBP24.58■■□□□ 1.52
VEGFA-209ENST00000425836 EPOP01588 193 aa24.58■■□□□ 1.52
VEGFA-209ENST00000425836 ZSCAN5DPP0CG00 497 aa24.58■■□□□ 1.52
VEGFA-209ENST00000425836 NFKBIAP25963 317 aa24.58■■□□□ 1.52
VEGFA-209ENST00000425836 COILP38432 576 aaPredicted RBP24.58■■□□□ 1.52
VEGFA-209ENST00000425836 LIG3P49916 1009 aa24.58■■□□□ 1.52
VEGFA-209ENST00000425836 PEAR1Q5VY43 1037 aaPredicted RBP24.58■■□□□ 1.52
VEGFA-209ENST00000425836 GSTA5Q7RTV2 222 aa24.58■■□□□ 1.52
VEGFA-209ENST00000425836 ZSCAN30Q86W11 494 aa24.58■■□□□ 1.52
VEGFA-209ENST00000425836 RMDN1Q96DB5 314 aa24.58■■□□□ 1.52
VEGFA-209ENST00000425836 PPP1R2P1Q96PQ5 205 aa24.58■■□□□ 1.52
VEGFA-209ENST00000425836 SLC17A9Q9BYT1 436 aa24.58■■□□□ 1.52
VEGFA-209ENST00000425836 RNF14Q9UBS8 474 aa24.58■■□□□ 1.52
VEGFA-209ENST00000425836 SLC31A1O15431 190 aa24.57■■□□□ 1.52
VEGFA-209ENST00000425836 PHF2O75151 1096 aa24.57■■□□□ 1.52
VEGFA-209ENST00000425836 NDST3O95803 873 aa24.57■■□□□ 1.52
VEGFA-209ENST00000425836 CYP2A6P11509 494 aaPredicted RBP24.57■■□□□ 1.52
VEGFA-209ENST00000425836 VIPR1P32241 457 aa24.57■■□□□ 1.52
VEGFA-209ENST00000425836 NUDT1P36639 197 aa24.57■■□□□ 1.52
VEGFA-209ENST00000425836 MPLP40238 635 aa24.57■■□□□ 1.52
VEGFA-209ENST00000425836 GRIA4P48058 902 aa24.57■■□□□ 1.52
VEGFA-209ENST00000425836 SETMARQ53H47 684 aaPredicted RBP24.57■■□□□ 1.52
VEGFA-209ENST00000425836 FAXCQ5TGI0 409 aa24.57■■□□□ 1.52
VEGFA-209ENST00000425836 LIPIQ6XZB0 460 aa24.57■■□□□ 1.52
VEGFA-209ENST00000425836 NCDNQ9UBB6 729 aa24.57■■□□□ 1.52
VEGFA-209ENST00000425836 GPR179Q6PRD1 2367 aa24.56■■□□□ 1.52
VEGFA-209ENST00000425836 PAK4O96013 591 aaPredicted RBP24.56■■□□□ 1.52
VEGFA-209ENST00000425836 LHCGRP22888 699 aa24.56■■□□□ 1.52
VEGFA-209ENST00000425836 RPL22P35268 128 aaKnown RBP24.56■■□□□ 1.52
VEGFA-209ENST00000425836 ACTN2P35609 894 aa24.56■■□□□ 1.52
VEGFA-209ENST00000425836 DPP6P42658 865 aa24.56■■□□□ 1.52
VEGFA-209ENST00000425836 PAFAH1B1P43034 410 aa24.56■■□□□ 1.52
VEGFA-209ENST00000425836 SGCGQ13326 291 aa24.56■■□□□ 1.52
VEGFA-209ENST00000425836 CCDC6Q16204 474 aa24.56■■□□□ 1.52
VEGFA-209ENST00000425836 CCDC137Q6PK04 289 aaKnown RBP24.56■■□□□ 1.52
VEGFA-209ENST00000425836 TSPAN33Q86UF1 283 aa24.56■■□□□ 1.52
VEGFA-209ENST00000425836 TAB3Q8N5C8 712 aaPredicted RBP24.56■■□□□ 1.52
VEGFA-209ENST00000425836 PAK5Q9P286 719 aa24.56■■□□□ 1.52
VEGFA-209ENST00000425836 DMTF1Q9Y222 760 aa24.56■■□□□ 1.52
VEGFA-209ENST00000425836 A0A0U1RQS6 177 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 CAPN8A6NHC0 703 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 TM7SF2O76062 418 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 HEXIM1O94992 359 aaKnown RBP24.55■■□□□ 1.52
VEGFA-209ENST00000425836 ATXN1LP0C7T5 689 aaKnown RBP24.55■■□□□ 1.52
VEGFA-209ENST00000425836 C6P13671 934 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 HOXD12P35452 270 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 CNGA3Q16281 694 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 KCTD19Q17RG1 926 aaPredicted RBP24.55■■□□□ 1.52
VEGFA-209ENST00000425836 PLA2G2CQ5R387 149 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 CCDC70Q6NSX1 233 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 CRTC1Q6UUV9 634 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 ZCCHC9Q8N567 271 aaKnown RBP24.55■■□□□ 1.52
VEGFA-209ENST00000425836 ASB12Q8WXK4 309 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 RUBCNQ92622 972 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 SERAC1Q96JX3 654 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 LYSMD1Q96S90 227 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 FSD1LQ9BXM9 530 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 ETNK1Q9HBU6 452 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 COQ6Q9Y2Z9 468 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 THADAQ6YHU6 1953 aa24.55■■□□□ 1.52
VEGFA-209ENST00000425836 WNT9AO14904 365 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 BCAT2O15382 392 aaPredicted RBP24.54■■□□□ 1.52
VEGFA-209ENST00000425836 AGTP01019 485 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 TUBB4AP04350 444 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 ELFN1P0C7U0 828 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 ADRA1AP35348 466 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 CHRNA4P43681 627 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 FNTAP49354 379 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 LMNB2Q03252 620 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 SIRPB2Q5JXA9 342 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 KCTD11Q693B1 232 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 CBARPQ8N350 705 aaPredicted RBP24.54■■□□□ 1.52
VEGFA-209ENST00000425836 DCLK2Q8N568 766 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 SLC25A41Q8N5S1 370 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 SLC6A18Q96N87 628 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 FICDQ9BVA6 458 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 TM9SF3Q9HD45 589 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 SUSD2Q9UGT4 822 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 GNSP15586 552 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 FDFT1P37268 417 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 TNNT3P45378 269 aaPredicted RBP24.54■■□□□ 1.52
VEGFA-209ENST00000425836 OLIG2Q13516 323 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 SPARCL1Q14515 664 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms