RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 SPATA24Q86W54 205 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 LRRC49Q8IUZ0 686 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 MCEMP1Q8IX19 187 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ZNF276Q8N554 614 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ZGPATQ8N5A5 531 aaKnown RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 PTGR2Q8N8N7 351 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 TC2NQ8N9U0 490 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 KDM1BQ8NB78 822 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 BBOF1Q8ND07 529 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 MCUQ8NE86 351 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 FBXO18Q8NFZ0 1043 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 NEK11Q8NG66 645 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 OR7D4Q8NG98 312 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 OR52M1Q8NGK5 317 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 OR13C2Q8NGS9 318 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 OR8K3Q8NH51 312 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 MIPOL1Q8TD10 442 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 SLC2A12Q8TD20 617 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 CASKIN2Q8WXE0 1202 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 HAS1Q92839 578 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 NACC2Q96BF6 587 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ZDHHC12Q96GR4 267 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 PRR11Q96HE9 360 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ZNF668Q96K58 619 aaPredicted RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 FAM227BQ96M60 508 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 EGFL8Q99944 293 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 CCDC77Q9BR77 488 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 KIFC3Q9BVG8 833 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 CACNG6Q9BXT2 260 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 PUS3Q9BZE2 481 aaKnown RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 FAM129AQ9BZQ8 928 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 EPC1Q9H2F5 836 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 XKR8Q9H6D3 395 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 LRRC40Q9H9A6 602 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 SYTL2Q9HCH5 934 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 RRP7BPQ9NSQ0 103 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.78□□□□□ -1.81e-7■■■■□ 21
SF3B1-205ENST00000424674 SOHLH2Q9NX45 425 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 DKK4Q9UBT3 224 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 TRPS1Q9UHF7 1281 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ATP6V1HQ9UI12 483 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ITGA11Q9UKX5 1188 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 PADI1Q9ULC6 663 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 CCPG1Q9ULG6 757 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 CDYLQ9Y232 598 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 RUVBL1Q9Y265 456 aaKnown RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 TDRKHQ9Y2W6 561 aaKnown RBP3.78□□□□□ -1.8
SF3B1-205ENST00000424674 ADAM18Q9Y3Q7 739 aa3.78□□□□□ -1.8
SF3B1-205ENST00000424674 TTC41PQ6P2S7 1318 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 NPHP3Q7Z494 1330 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 POLR2AP24928 1970 aaKnown RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 TEX13CA0A0J9YWL9 993 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 LOC100653049A0A140TA62 436 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 GOLGA6L7A0A1B0GV03 622 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 A0A1W2PQM1 296 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 TMEM191CA6NGB0 347 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 FAM90A7PA6NKC0 464 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 FAM90A22PA8MWA6 464 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 FAM90A12PA8MX19 464 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 FAM90A23PA8MXZ1 464 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 KIF28PB7ZC32 967 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 TEX22C9J3V5 150 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 E9PBE3 544 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 H7C4K7 107 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 E2F3O00716 465 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 SYN3O14994 580 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 ZNF185O15231 689 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 TEX33O43247 280 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 PRAMEF4O60810 478 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 TAF5LO75529 589 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 KRT34O76011 436 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 AKR7A3O95154 331 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 RASAL1O95294 804 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 DIRAS3O95661 229 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 KRT8P05787 483 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 TPM3P06753 285 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 MMP2P08253 660 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 NCF1P14598 390 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 ZFXP17010 805 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 ZNF8P17098 575 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 HK1P19367 917 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 AHCYP23526 432 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 HOXA13P31271 388 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 MCM5P33992 734 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 IDUAP35475 653 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 CPOXP36551 454 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 ABCG1P45844 678 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 PTDSS1P48651 473 aaKnown RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 DHPSP49366 369 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 PMS2P54278 862 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 SPAG1Q07617 926 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 CCDC173Q0VFZ6 552 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 SCGB2A2Q13296 93 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 MTM1Q13496 603 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 DDX39BQ13838 428 aaKnown RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 ZNF273Q14593 569 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 HADHQ16836 314 aaKnown RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 AAK1Q2M2I8 961 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 LETM2Q2VYF4 491 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 KRTAP15-1Q3LI76 137 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms