RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 BOLA2Q9H3K6 86 aa4.39□□□□□ -1.71
SDCBPP2-201ENST00000424643 ANKEF1Q9NU02 776 aa4.39□□□□□ -1.71
SDCBPP2-201ENST00000424643 ARL8BQ9NVJ2 186 aa4.39□□□□□ -1.71
SDCBPP2-201ENST00000424643 TMEM248Q9NWD8 314 aa4.39□□□□□ -1.71
SDCBPP2-201ENST00000424643 IL1RAPL1Q9NZN1 696 aa4.39□□□□□ -1.71
SDCBPP2-201ENST00000424643 MPP6Q9NZW5 540 aa4.39□□□□□ -1.71
SDCBPP2-201ENST00000424643 FOXJ2Q9P0K8 574 aa4.39□□□□□ -1.71
SDCBPP2-201ENST00000424643 HMG20BQ9P0W2 317 aa4.39□□□□□ -1.71
SDCBPP2-201ENST00000424643 PEMTQ9UBM1 199 aa4.39□□□□□ -1.71
SDCBPP2-201ENST00000424643 ADD3Q9UEY8 706 aaKnown RBP4.39□□□□□ -1.71
SDCBPP2-201ENST00000424643 MYO5AQ9Y4I1 1855 aaKnown RBP4.39□□□□□ -1.71
SDCBPP2-201ENST00000424643 C10orf71Q711Q0 1435 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 A0A0D9SFI3 127 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 STRNO43815 780 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 CEP104O60308 925 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 CBX6O95503 412 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 HNRNPCP07910 306 aaKnown RBP eCLIP4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 MMP10P09238 476 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 NFKBIAP25963 317 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 ICAM3P32942 547 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 HSPA4P34932 840 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 ACTN2P35609 894 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 KRT20P35900 424 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 ARL1P40616 181 aaPredicted RBP4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 PTPN9P43378 593 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 CPA2P48052 419 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 PTH2RP49190 550 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 ZNF169Q14929 603 aaPredicted RBP4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 PFKFB3Q16875 520 aaPredicted RBP4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 FBXO43Q4G163 708 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 RILPL1Q5EBL4 403 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 CFAP58Q5T655 872 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 TSTD2Q5T7W7 516 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 STRIP1Q5VSL9 837 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 ZNF280DQ6N043 979 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 TMEM81Q6P7N7 255 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 IKBIPQ70UQ0 350 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 RRM2BQ7LG56 351 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 GALNT5Q7Z7M9 940 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 TTC39CQ8N584 583 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 EXD3Q8N9H8 876 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 SETD9Q8NE22 299 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 SNX21Q969T3 373 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 PERPQ96FX8 193 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 PDLIM2Q96JY6 352 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 ZNF347Q96SE7 839 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 CADM1Q9BY67 442 aaKnown RBP4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 ANKRD2Q9GZV1 360 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 MUC13Q9H3R2 512 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 SYNCQ9H7C4 482 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 PAG1Q9NWQ8 432 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 ATP6V0A2Q9Y487 856 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 TTLL3Q9Y4R7 772 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 CACNA1SQ13698 1873 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 RAD50Q92878 1312 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 SRCAPQ6ZRS2 3230 aa4.38□□□□□ -1.71
SDCBPP2-201ENST00000424643 BRCA1P38398 1863 aaKnown RBP4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 TCRBV7S3A2A0A539 114 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 TCRBV5S1A1TA0A578 114 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 B4DLN1 442 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 HIP1O00291 1037 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 LDLRAD4O15165 306 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 SGPL1O95470 568 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 UQCRFS1P1P0C7P4 283 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 RRM1P23921 792 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 IDUAP35475 653 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 BSGP35613 385 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 EIF3BP55884 814 aaKnown RBP4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 RPL7AP62424 266 aaKnown RBP4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 HOXA4Q00056 320 aaPredicted RBP4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 MC1RQ01726 317 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 ZBTB16Q05516 673 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 SEMA3AQ14563 771 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 WTAPQ15007 396 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 MED22Q15528 200 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 CCDC158Q5M9N0 1113 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 MFSD4BQ5TF39 518 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 AADACL2Q6P093 401 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 TFAP2DQ7Z6R9 452 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 ZNF589Q86UQ0 364 aaPredicted RBP4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 RFX6Q8HWS3 928 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 RHPN2Q8IUC4 686 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 CPXM2Q8N436 756 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 SCAIQ8N9R8 606 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 DNAAF1Q8NEP3 725 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 HSPH1Q92598 858 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 NSUN4Q96CB9 384 aaKnown RBP4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 BBC3Q96PG8 261 aaPredicted RBP4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 HEMGNQ9BXL5 484 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 FTOQ9C0B1 505 aaKnown RBP eCLIP4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 Q9N2J8 555 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 PIH1D3Q9NQM4 214 aaKnown RBP4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 SH3BP4Q9P0V3 963 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 POLLQ9UGP5 575 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 LIMA1Q9UHB6 759 aaKnown RBP4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 FBXO4Q9UKT5 387 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 CORO1CQ9ULV4 474 aaPredicted RBP4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 DHDHQ9UQ10 334 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 DTX4Q9Y2E6 619 aa4.37□□□□□ -1.71
SDCBPP2-201ENST00000424643 KCNE2Q9Y6J6 123 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms