RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 MAGEA3P43357 314 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 RPS14P62263 151 aaKnown RBP13.5□□□□□ -0.25
PRPF39-202ENST00000424478 MTAPQ13126 283 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 UAP1Q16222 522 aaPredicted RBP13.5□□□□□ -0.25
PRPF39-202ENST00000424478 UGP2Q16851 508 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 ZNF805Q5CZA5 627 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 ESRP1Q6NXG1 681 aaKnown RBP13.5□□□□□ -0.25
PRPF39-202ENST00000424478 CENPUQ71F23 418 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 METTL3Q86U44 580 aaKnown RBP13.5□□□□□ -0.25
PRPF39-202ENST00000424478 SUGP1Q8IWZ8 645 aaKnown RBP13.5□□□□□ -0.25
PRPF39-202ENST00000424478 KLHDC8BQ8IXV7 354 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 UBALD2Q8IYN6 164 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 MCUQ8NE86 351 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 KLK6Q92876 244 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 OSBPL6Q9BZF3 934 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 CD248Q9HCU0 757 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 NINJ2Q9NZG7 142 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 B4GALT6Q9UBX8 382 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 C1orf232A0A0U1RR37 186 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 SPINT1O43278 529 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 GPX6P59796 221 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 HDDC3Q8N4P3 179 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 PYROXD1Q8WU10 500 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 MRGPRX1Q96LB2 322 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 CPEB1Q9BZB8 566 aaKnown RBP13.49□□□□□ -0.25
PRPF39-202ENST00000424478 SUN2Q9UH99 717 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 MMP17Q9ULZ9 603 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 SIT1Q9Y3P8 196 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 TEX264Q9Y6I9 313 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.49□□□□□ -0.25
PRPF39-202ENST00000424478 P2RY2P41231 377 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 CSNK1DP48730 415 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 ARSDP51689 593 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 MRPS21P82921 87 aaKnown RBP13.49□□□□□ -0.25
PRPF39-202ENST00000424478 FBXL19Q6PCT2 694 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 GLT6D1Q7Z4J2 308 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 ZNF669Q96BR6 464 aaPredicted RBP13.49□□□□□ -0.25
PRPF39-202ENST00000424478 ECHDC3Q96DC8 303 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 DNAJC1Q96KC8 554 aaKnown RBP13.49□□□□□ -0.25
PRPF39-202ENST00000424478 ADGRE3Q9BY15 652 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 RSPH9Q9H1X1 276 aaPredicted RBP13.49□□□□□ -0.25
PRPF39-202ENST00000424478 VPS37BQ9H9H4 285 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 HAUS2Q9NVX0 235 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 BFARQ9NZS9 450 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 ZC3H7BQ9UGR2 993 aaKnown RBP13.49□□□□□ -0.25
PRPF39-202ENST00000424478 LRRK1Q38SD2 2015 aa13.49□□□□□ -0.25
PRPF39-202ENST00000424478 A0A0J9YYE9 177 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 ERI2A8K979 691 aaKnown RBP13.48□□□□□ -0.25
PRPF39-202ENST00000424478 TRBC1P01850 177 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 GABRG2P18507 467 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 TNFRSF8P28908 595 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 ABCG1P45844 678 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 SARNPP82979 210 aaKnown RBP13.48□□□□□ -0.25
PRPF39-202ENST00000424478 CNGA3Q16281 694 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 ALS2CLQ60I27 953 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 LRRC66Q68CR7 880 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 CWF19L1Q69YN2 538 aaKnown RBP13.48□□□□□ -0.25
PRPF39-202ENST00000424478 UNC5AQ6ZN44 842 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 LINC00523Q86TU6 105 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 LDB1Q86U70 411 aaPredicted RBP13.48□□□□□ -0.25
PRPF39-202ENST00000424478 STAMBPL1Q96FJ0 436 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 EPB41L4BQ9H329 900 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 XAB2Q9HCS7 855 aaKnown RBP13.48□□□□□ -0.25
PRPF39-202ENST00000424478 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.48□□□□□ -0.25
PRPF39-202ENST00000424478 RPS6KL1Q9Y6S9 549 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 ABCA7Q8IZY2 2146 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 SDR42E2A6NKP2 422 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 SMIM23A6NLE4 172 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 PRNPP04156 253 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 SHBGP04278 402 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 XPAP23025 273 aaPredicted RBP13.48□□□□□ -0.25
PRPF39-202ENST00000424478 CRTC1Q6UUV9 634 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 SHDQ96IW2 340 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 FBXL12Q9NXK8 326 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 BCCIPQ9P287 314 aaKnown RBP eCLIP13.48□□□□□ -0.25
PRPF39-202ENST00000424478 TRPM6Q9BX84 2022 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 LDB2O43679 373 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 SOCS5O75159 536 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 FGF1P05230 155 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 H2AFXP16104 143 aaPredicted RBP13.48□□□□□ -0.25
PRPF39-202ENST00000424478 HLA-DPA1P20036 260 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 PMS2P54278 862 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 TUBB4BP68371 445 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 CDK16Q00536 496 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 CAV1Q03135 178 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 FBXO43Q4G163 708 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 BEND6Q5SZJ8 279 aaPredicted RBP13.48□□□□□ -0.25
PRPF39-202ENST00000424478 DEFB119Q8N690 84 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 OR4K2Q8NGD2 314 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 OR2T3Q8NH03 318 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 MYOCQ99972 504 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 GPR63Q9BZJ6 419 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 FAM96AQ9H5X1 160 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 PPANQ9NQ55 473 aaKnown RBP13.48□□□□□ -0.25
PRPF39-202ENST00000424478 ZNF711Q9Y462 761 aa13.48□□□□□ -0.25
PRPF39-202ENST00000424478 FAM86C2PA6NEL3 165 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 NEMP1O14524 444 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 ERVK-10P10266 1014 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 ADRB3P13945 408 aa13.47□□□□□ -0.25
PRPF39-202ENST00000424478 MAT2AP31153 395 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms