RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 HMGN1P05114 100 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 FGF4P08620 206 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 SERPINF2P08697 491 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 ACAA1P09110 424 aaPredicted RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 TXNP10599 105 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 CYP2C9P11712 490 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 VEGFAP15692 232 aaPredicted RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 HOXB8P17481 243 aaPredicted RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 VCLP18206 1134 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 RHCEP18577 417 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 EIF2S2P20042 333 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 CNTFP26441 200 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 PDIA3P30101 505 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 TAGLN2P37802 199 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 ZNF81P51508 661 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 NR1H2P55055 460 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 ADARP55265 1226 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 SCAND1P57086 179 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 EIF3EP60228 445 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 TSPAN5P62079 268 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 ASIC1P78348 528 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 KCNJ10P78508 379 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 IFI35P80217 286 aaPredicted RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 RHDQ02161 417 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 PIGFQ07326 219 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 GOLGA8FQ08AF8 430 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 GOLGA8DPQ0D2H9 430 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 PLD1Q13393 1074 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 HABP2Q14520 560 aaPredicted RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 HLXQ14774 488 aaPredicted RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 NR1D2Q14995 579 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 ACAP2Q15057 778 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 EZH2Q15910 746 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 ODF2Q5BJF6 829 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 SYDE2Q5VT97 1194 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 JMJD6Q6NYC1 403 aaPredicted RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 CEP85Q6P2H3 762 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 MACC1Q6ZN28 852 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 CHST15Q7LFX5 561 aaPredicted RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 PIWIL3Q7Z3Z3 882 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 PEG10Q86TG7 708 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 ERICH1Q86X53 443 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 STX12Q86Y82 276 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 PSTKQ8IV42 348 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 MAML2Q8IZL2 1156 aaPredicted RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 SLC38A6Q8IZM9 456 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 ST13P4Q8IZP2 240 aaPredicted RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 CNTD1Q8N815 330 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 ANKFN1Q8N957 763 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 Q8NFD4 153 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 GANCQ8TET4 914 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 INPP5DQ92835 1189 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 RAB7BQ96AH8 199 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 AK8Q96MA6 479 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 NSMCE3Q96MG7 304 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 CAMK1GQ96NX5 476 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 WACQ9BTA9 647 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 PACSIN1Q9BY11 444 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 FRMD8P1Q9BZ68 369 aaPredicted RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 SLC29A3Q9BZD2 475 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 TRIM2Q9C040 744 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 OR10A4Q9H209 315 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 TCF7L1Q9HCS4 588 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 TUFT1Q9NNX1 390 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 SARS2Q9NP81 518 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 MRPL40Q9NQ50 206 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 NRBP2Q9NSY0 501 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 FLRT1Q9NZU1 646 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 NDUFA13Q9P0J0 144 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 COX16Q9P0S2 106 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 TRIM10Q9UDY6 481 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 CDC23Q9UJX2 597 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 RCOR1Q9UKL0 485 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 CHMP2BQ9UQN3 213 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 DNAJC16Q9Y2G8 782 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 DERAQ9Y315 318 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 PCDHGA1Q9Y5H4 931 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 STON1Q9Y6Q2 735 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 MYBBP1AQ9BQG0 1328 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 WIPF3A6NGB9 483 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 FZD9O00144 591 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 PCDH17O14917 1159 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 KIAA0391O15091 583 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 CLDN3O15551 220 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 CA12O43570 354 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 KRT86O43790 486 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 ECE2O60344 883 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 NOL3O60936 208 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 CRTAPO75718 401 aaPredicted RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 CAMTA2O94983 1202 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 OXSR1O95747 527 aaPredicted RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 CKMT1AP12532 417 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 EZRP15311 586 aaKnown RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 CHN1P15882 459 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 POLR2CP19387 275 aaPredicted RBP2.93□□□□□ -1.94
PMS1-209ENST00000424059 HLA-DPA1P20036 260 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 AGXTP21549 392 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 GALP22466 123 aa2.93□□□□□ -1.94
PMS1-209ENST00000424059 PTBP1P26599 531 aaKnown RBP eCLIP2.93□□□□□ -1.944e-17■■■■■ 65.4
PMS1-209ENST00000424059 BMI1P35226 326 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms