RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 NXPE1Q8N323 547 aa5.19□□□□□ -1.58
SFXN1-202ENST00000421887 CHTF18Q8WVB6 975 aa5.19□□□□□ -1.58
SFXN1-202ENST00000421887 USP13Q92995 863 aaPredicted RBP5.19□□□□□ -1.58
SFXN1-202ENST00000421887 FBXL20Q96IG2 436 aa5.19□□□□□ -1.58
SFXN1-202ENST00000421887 MRI1Q9BV20 369 aa5.19□□□□□ -1.58
SFXN1-202ENST00000421887 LRRC2Q9BYS8 371 aa5.19□□□□□ -1.58
SFXN1-202ENST00000421887 TRIM4Q9C037 500 aa5.19□□□□□ -1.58
SFXN1-202ENST00000421887 POLR3FQ9H1D9 316 aaPredicted RBP5.19□□□□□ -1.58
SFXN1-202ENST00000421887 CXCL16Q9H2A7 254 aa5.19□□□□□ -1.58
SFXN1-202ENST00000421887 MS4A5Q9H3V2 200 aa5.19□□□□□ -1.58
SFXN1-202ENST00000421887 ANKMY1Q9P2S6 941 aa5.19□□□□□ -1.58
SFXN1-202ENST00000421887 HSFX1Q9UBD0 423 aa5.19□□□□□ -1.58
SFXN1-202ENST00000421887 DDX25Q9UHL0 483 aaKnown RBP5.19□□□□□ -1.58
SFXN1-202ENST00000421887 PIEZO2Q9H5I5 2752 aa5.19□□□□□ -1.58
SFXN1-202ENST00000421887 TMEM131Q92545 1883 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 KALRNO60229 2985 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 MTMR11A4FU01 709 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 SGK1O00141 431 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 TLX3O43711 291 aaPredicted RBP5.18□□□□□ -1.58
SFXN1-202ENST00000421887 SOAT2O75908 522 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 OAZ2O95190 189 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 TDP2O95551 362 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 RAP2AP10114 183 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 SLC6A2P23975 617 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 NMT1P30419 496 aaKnown RBP5.18□□□□□ -1.58
SFXN1-202ENST00000421887 ARL2P36404 184 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 OSTNP61366 133 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 STRN3Q13033 797 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 CTTNQ14247 550 aaKnown RBP5.18□□□□□ -1.58
SFXN1-202ENST00000421887 ZNF268Q14587 947 aaPredicted RBP5.18□□□□□ -1.58
SFXN1-202ENST00000421887 PPP2R5AQ15172 486 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 FAM187BQ17R55 369 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 HLA-BQ31612 363 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 ATF7IP2Q5U623 682 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 KIAA0895LQ68EN5 471 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 TXNDC8Q6A555 127 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 NCAPH2Q6IBW4 605 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 B3GNT9Q6UX72 402 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 DSTYKQ6XUX3 929 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 ZNF782Q6ZMW2 699 aaPredicted RBP5.18□□□□□ -1.58
SFXN1-202ENST00000421887 SLC41A1Q8IVJ1 513 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 EFCAB13Q8IY85 973 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 IL17RCQ8NAC3 791 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 ATAD1Q8NBU5 361 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 ZNF248Q8NDW4 579 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 BEST2Q8NFU1 509 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 DEPTORQ8TB45 409 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 ETNPPLQ8TBG4 499 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 DENND1AQ8TEH3 1009 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 FAM20AQ96MK3 541 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 PNKPQ96T60 521 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 IL25Q9H293 177 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 FZD8Q9H461 694 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 TTC12Q9H892 705 aaPredicted RBP5.18□□□□□ -1.58
SFXN1-202ENST00000421887 TRPC7Q9HCX4 862 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 XPNPEP1Q9NQW7 623 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 RGL1Q9NZL6 768 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 CALCOCO1Q9P1Z2 691 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 WRAP73Q9P2S5 460 aaPredicted RBP5.18□□□□□ -1.58
SFXN1-202ENST00000421887 MAGED2Q9UNF1 606 aaPredicted RBP5.18□□□□□ -1.58
SFXN1-202ENST00000421887 BTBD3Q9Y2F9 522 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 PCDHGB2Q9Y5G2 931 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 TCHHQ07283 1943 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 PTPN13Q12923 2485 aa5.18□□□□□ -1.58
SFXN1-202ENST00000421887 ANK1P16157 1881 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 MYOFQ9NZM1 2061 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 CYP3A7-CYP3A51PA0A087WV96 503 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 TRAV19A0A0A6YYK7 116 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 IGHV1OR15-9A0A0B4J2B8 117 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 LINC01548A6NM66 108 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 ACKR2O00590 384 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 BCAT2O15382 392 aaPredicted RBP5.17□□□□□ -1.58
SFXN1-202ENST00000421887 MPPED1O15442 326 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 TSPAN6O43657 245 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 USO1O60763 962 aaKnown RBP5.17□□□□□ -1.58
SFXN1-202ENST00000421887 KATNA1O75449 491 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 KAT7O95251 611 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 BAG4O95429 457 aaKnown RBP5.17□□□□□ -1.58
SFXN1-202ENST00000421887 ELFN1P0C7U0 828 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 CYP3A7P24462 503 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 ADSLP30566 484 aaPredicted RBP5.17□□□□□ -1.58
SFXN1-202ENST00000421887 GRK6P43250 576 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 TARDBPQ13148 414 aaKnown RBP eCLIP5.17□□□□□ -1.58
SFXN1-202ENST00000421887 DMP1Q13316 513 aaPredicted RBP5.17□□□□□ -1.58
SFXN1-202ENST00000421887 MYBPC2Q14324 1141 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 AWAT2Q6E213 333 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 MOXD1Q6UVY6 613 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 ZNF572Q7Z3I7 529 aaPredicted RBP5.17□□□□□ -1.58
SFXN1-202ENST00000421887 STRA8Q7Z7C7 330 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 MON1AQ86VX9 555 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 CHD1LQ86WJ1 897 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 ZCCHC9Q8N567 271 aaKnown RBP5.17□□□□□ -1.58
SFXN1-202ENST00000421887 FSIP1Q8NA03 581 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 MCPH1Q8NEM0 835 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 SEMA6DQ8NFY4 1073 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 MARS2Q96GW9 593 aaKnown RBP5.17□□□□□ -1.58
SFXN1-202ENST00000421887 ZNF419Q96HQ0 510 aaPredicted RBP5.17□□□□□ -1.58
SFXN1-202ENST00000421887 ACAP3Q96P50 834 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 TCHPQ9BT92 498 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 SEMA4CQ9C0C4 833 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms