RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 GGT5P36269 586 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 FCGRTP55899 365 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 FASTKQ14296 549 aaKnown RBP13.4□□□□□ -0.26
MCF2L-213ENST00000421756 MBTPS1Q14703 1052 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 KIAA1841Q6NSI8 718 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 CLEC14AQ86T13 490 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 TMEM151AQ8N4L1 468 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 STYXQ8WUJ0 223 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 APBB2Q92870 758 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 TUBGCP3Q96CW5 907 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 CSNK1G1Q9HCP0 422 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 CLIC5Q9NZA1 410 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 ADAM28Q9UKQ2 775 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 CORO1CQ9ULV4 474 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-213ENST00000421756 CCDC162PA2VCL2 907 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 E7ENX8 843 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 RHOBTB1O94844 696 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 GKP32189 559 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 RGRP47804 291 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 ALDH1A3P47895 512 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 FOXD4Q12950 439 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-213ENST00000421756 VPS26BQ4G0F5 336 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 RANBP10Q6VN20 620 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 BNIPLQ7Z465 357 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 ST13P5Q8NFI4 369 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-213ENST00000421756 C3orf30Q96M34 536 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 ACOX2Q99424 681 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 UBE2OQ9C0C9 1292 aaKnown RBP13.4□□□□□ -0.26
MCF2L-213ENST00000421756 A0A1B0GTW7 788 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 OR1I1O60431 355 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 PQBP1O60828 265 aaKnown RBP13.4□□□□□ -0.27
MCF2L-213ENST00000421756 KATNA1O75449 491 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 CKBP12277 381 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 CYBAP13498 195 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 CREB5Q02930 508 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 SEMA3AQ14563 771 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 ZRANB3Q5FWF4 1079 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 AGAP9Q5VTM2 703 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 KDM1BQ8NB78 822 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 OR4K2Q8NGD2 314 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 OR13J1Q8NGT2 312 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 RAB3IL1Q8TBN0 382 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 SOCS4Q8WXH5 440 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 MRPL1Q9BYD6 325 aaKnown RBP13.4□□□□□ -0.27
MCF2L-213ENST00000421756 CCDC68Q9H2F9 335 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 TLR9Q9NR96 1032 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 PCDHB5Q9Y5E4 795 aa13.4□□□□□ -0.27
MCF2L-213ENST00000421756 TBKBP1A7MCY6 615 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 BAIAP3O94812 1187 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 AGTR2P50052 363 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 SULT2A1Q06520 285 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 RTP2Q5QGT7 225 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 IRGCQ6NXR0 463 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 MON1AQ86VX9 555 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 ACTRT2Q8TDY3 377 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 EME1Q96AY2 570 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 SUSD3Q96L08 255 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 LOC285556D6RIA3 1793 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 HEATR9A2RTY3 570 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 ZNF839A8K0R7 811 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 TNFRSF10BO14763 440 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 GUCA1CO95843 209 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 HCAR3P49019 387 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 YBX1P67809 324 aaKnown RBP13.39□□□□□ -0.27
MCF2L-213ENST00000421756 SGO1Q5FBB7 561 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 CYS1Q717R9 158 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 ZBTB46Q86UZ6 589 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 PTERQ96BW5 349 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 IL12RB2Q99665 862 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 MUC3BQ9H195 1237 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 SMOC2Q9H3U7 446 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 FAM124BQ9H5Z6 455 aaPredicted RBP13.39□□□□□ -0.27
MCF2L-213ENST00000421756 EFCAB1Q9HAE3 211 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 GALPQ9UBC7 116 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 VCANP13611 3396 aa13.39□□□□□ -0.27
MCF2L-213ENST00000421756 SNAP91O60641 907 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 GLP2RO95838 553 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 LTA4HP09960 611 aaKnown RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 VCLP18206 1134 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 FOLH1Q04609 750 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 MAPRE1Q15691 268 aaKnown RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 LRRC73Q5JTD7 316 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 FOXB2Q5VYV0 432 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 PKP2Q99959 881 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 PRDM5Q9NQX1 630 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 SAC3D1A6NKF1 404 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 H3BMM5 538 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 PSMD12O00232 456 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 SDHDO14521 159 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 UBFD1O14562 309 aaKnown RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 IPO13O94829 963 aaKnown RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 SLC2A3P11169 496 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 ATP5F1P24539 256 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 OR1D2P34982 312 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 IL23RQ5VWK5 629 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 POTEHQ6S545 545 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 DCP1BQ8IZD4 617 aaKnown RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 CEP70Q8NHQ1 597 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 DNAJB14Q8TBM8 379 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 VPS33AQ96AX1 596 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms