RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 HEMK1Q9Y5R4 338 aaPredicted RBP16.97■□□□□ 0.31
UPF3AP3-201ENST00000420996 TNFRSF10CO14798 259 aa16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 FGF10O15520 208 aaPredicted RBP16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 CCP110O43303 1012 aa16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 BUB1BO60566 1050 aaPredicted RBP16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 CSNK1DP48730 415 aa16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 ZNF143P52747 638 aaPredicted RBP16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 KIAA1024LP59773 190 aa16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 CT47A1Q5JQC4 288 aaPredicted RBP16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 KCTD16Q68DU8 428 aa16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 TAF8Q7Z7C8 310 aa16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 CAMK1DQ8IU85 385 aa16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 PLA2G15Q8NCC3 412 aa16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 FAM46DQ8NEK8 389 aa16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 OR56A4Q8NGH8 313 aa16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 LRRC19Q9H756 370 aa16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 NLRC4Q9NPP4 1024 aa16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 DONSONQ9NYP3 566 aa16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 AHCTF1Q8WYP5 2266 aa16.96■□□□□ 0.31
UPF3AP3-201ENST00000420996 TCRBV5S1A1TA0A578 114 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 TMEM202A6NGA9 273 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 J3KR12 359 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 CACNB4O00305 520 aaPredicted RBP16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 PRAMEF11O60813 436 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 HOXC4P09017 264 aaPredicted RBP16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 ITIH1P19827 911 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 HTR7P34969 479 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 STAT1P42224 750 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 KLK7P49862 253 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 CSRP3P50461 194 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 NDST2P52849 883 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 SRSF6Q13247 344 aaKnown RBP16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 CLEC16AQ2KHT3 1053 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 C14orf28Q4W4Y0 310 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 SPRED1Q7Z699 444 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 ZSWIM9Q86XI8 627 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 EXTL1Q92935 676 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 FUBP1Q96AE4 644 aaKnown RBP16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 CMKLR1Q99788 373 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 ARHGAP9Q9BRR9 750 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 VPS16Q9H269 839 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 FGF22Q9HCT0 170 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 FAM207AQ9NSI2 230 aaPredicted RBP16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 STARD5Q9NSY2 213 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 LRIT1Q9P2V4 623 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 RNF215Q9Y6U7 377 aa16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 ARHGEF17Q96PE2 2063 aaPredicted RBP16.95■□□□□ 0.3
UPF3AP3-201ENST00000420996 PRAMEF33A0A0G2JMD5 474 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 ANKRD62A6NC57 917 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 EPHB6O15197 1021 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 ARHGAP6O43182 974 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 NUDT21O43809 227 aaKnown RBP16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 PRAMEF10O60809 474 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 RECQL5O94762 991 aaPredicted RBP16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 PRKCGP05129 697 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 SFTPCP11686 197 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 KELP23276 732 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 SERPINA4P29622 427 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 TRIM23P36406 574 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 RALGDSQ12967 914 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 ARHGEF7Q14155 803 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 HLTFQ14527 1009 aaKnown RBP eCLIP16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 MANEAQ5SRI9 462 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 DNAJC24Q6P3W2 148 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 LIPIQ6XZB0 460 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 MON1BQ7L1V2 547 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 SRLQ86TD4 932 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 CNPY3Q9BT09 278 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 TMEM168Q9H0V1 697 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 ATP13A3Q9H7F0 1226 aa16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 MRPL40Q9NQ50 206 aaKnown RBP16.94■□□□□ 0.3
UPF3AP3-201ENST00000420996 A0A1W2PQC6 194 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 ARHGAP42A6NI28 874 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 CYSRT1A8MQ03 144 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 TPM2P07951 284 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 ELFN1P0C7U0 828 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 ETV5P41161 510 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 RGRP47804 291 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 TPI1P60174 286 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 RPL7AP62424 266 aaKnown RBP16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 SYCP1Q15431 976 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 FKBP15Q5T1M5 1219 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 AFMIDQ63HM1 303 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 SPECC1LQ69YQ0 1117 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 ZFAND4Q86XD8 727 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 DTX1Q86Y01 620 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 SLITRK4Q8IW52 837 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 SFTPA2Q8IWL1 248 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 ZSCAN1Q8NBB4 408 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 TSEN2Q8NCE0 465 aaKnown RBP16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 USP7Q93009 1102 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 ECHDC3Q96DC8 303 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 MCEEQ96PE7 176 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 SEMA3CQ99985 751 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 B3GNT4Q9C0J1 378 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 DPEP2Q9H4A9 486 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 IL17BQ9UHF5 180 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 PCDHB11Q9Y5F2 797 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 PCDHGA4Q9Y5G9 962 aa16.93■□□□□ 0.3
UPF3AP3-201ENST00000420996 B4DGG1 531 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms