RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CAMK2AQ9UQM7 478 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 SCINQ9Y6U3 715 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 SCN5AQ14524 2016 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 CCDC189A1A4V9 331 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 TGFB1I1O43294 461 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 CREB3O43889 395 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 MT-CYBP00156 380 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 XBP1P17861 261 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 ICAM3P32942 547 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 KCNJ4P48050 445 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 ART1P52961 327 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 PPP2R5BQ15173 497 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 HLFQ16534 295 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 EIF2S3LQ2VIR3 472 aaKnown RBP4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 EFHC1Q5JVL4 640 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 NAA35Q5VZE5 725 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 ACAD10Q6JQN1 1059 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 ZC3HC1Q86WB0 502 aaKnown RBP4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 FBXL8Q96CD0 374 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 TBATAQ96M53 351 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 C6orf106Q9H6K1 298 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 WDR26Q9H7D7 661 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 PPP1R14DQ9NXH3 145 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 MPP6Q9NZW5 540 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 A4GNTQ9UNA3 340 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 FAM96BQ9Y3D0 163 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 PCDHGB1Q9Y5G3 927 aa4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 TCF20Q9UGU0 1960 aaKnown RBP4.53□□□□□ -1.68
HMGB1P49-201ENST00000418882 KDM3AQ9Y4C1 1321 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 TSPAN4O14817 238 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 KDM4BO94953 1096 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 NDUFB4O95168 129 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 MMP2P08253 660 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 IGHV4-30-4P0DP06 118 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 G6PDP11413 515 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 CHATP28329 748 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 ABCD1P33897 745 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 PAFAH1B1P43034 410 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 HARS2P49590 506 aaKnown RBP4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 EEF1A2Q05639 463 aaKnown RBP4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 COASYQ13057 564 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 IZUMO4Q1ZYL8 232 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 COL28A1Q2UY09 1125 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 CAPRIN2Q6IMN6 1127 aaKnown RBP4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 RRM2BQ7LG56 351 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 DCP1BQ8IZD4 617 aaKnown RBP4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 CNTROBQ8N137 903 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 TCP11L2Q8N4U5 519 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 ZBTB2Q8N680 514 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 CADM4Q8NFZ8 388 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 SPATA22Q8NHS9 363 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 NFKBIDQ8NI38 313 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 CREB3L4Q8TEY5 395 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 LMLNQ96KR4 655 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 STON1Q9Y6Q2 735 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 CAPN7Q9Y6W3 813 aa4.52□□□□□ -1.69
HMGB1P49-201ENST00000418882 IGLV5-37A0A075B6J1 123 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 CCDC196A0A1B0GTZ2 297 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 A0A1B0GUV1 79 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 SOCS6O14544 535 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 RGS2P41220 211 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 TRAF2Q12933 501 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 DLG1Q12959 904 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 ITGADQ13349 1161 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 SF3B4Q15427 424 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 HIST2H2ACQ16777 129 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 TCTN1Q2MV58 587 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 KLHL24Q6TFL4 600 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 SLC46A3Q7Z3Q1 461 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 HAPLN4Q86UW8 402 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 ZCCHC9Q8N567 271 aaKnown RBP4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 HUS1BQ8NHY5 278 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 RTP4Q96DX8 246 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 C1QTNF4Q9BXJ3 329 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 DDX31Q9H8H2 851 aaKnown RBP4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 BRF2Q9HAW0 419 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 VEZTQ9HBM0 779 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 SLCO3A1Q9UIG8 710 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 MKLN1Q9UL63 735 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 PAM16Q9Y3D7 125 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 TAF1P21675 1872 aa4.51□□□□□ -1.69
HMGB1P49-201ENST00000418882 IFITM10A6NMD0 228 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 SMTNL1A8MU46 457 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 BTBD18B2RXH4 712 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 ACOT8O14734 319 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 NPHP1O15259 732 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 SEC14L5O43304 696 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 CLDN14O95500 239 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 FTCDO95954 541 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 GNAQP50148 359 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 FGFBP1Q14512 234 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 C18orf65Q6ZTR6 163 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 LINGO2Q7L985 606 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 SCCPDHQ8NBX0 429 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 AGBL3Q8NEM8 1001 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 BEST2Q8NFU1 509 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 PERPQ96FX8 193 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 ADGRG7Q96K78 797 aa4.5□□□□□ -1.69
HMGB1P49-201ENST00000418882 PPP1R13BQ96KQ4 1090 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms