RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 TTC3P53804 2025 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 USP54Q70EL1 1684 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 LTBP4Q8N2S1 1624 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 OVOS2A0A0J9YW53 1432 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 CRB1P82279 1406 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 OVOS2Q6IE36 1432 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 TTC21AQ8NDW8 1320 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 A0A096LPK6 155 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 GOLGA6L10A0A0M3HER8 536 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 C17orf113A0A1B0GUU1 675 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 A0A1B0GVC2 190 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 DDTLA6NHG4 134 aaPredicted RBP2.8□□□□□ -1.96
VPS41-206ENST00000418457 FAM157AC9JC47 383 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 GOLGA6L19H0YKK7 550 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 STMND1H3BQB6 276 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 INO80B-WBP1J3KQ70 363 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 HMOX1P09601 288 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 PSG1P11464 419 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 TNFRSF1BP20333 461 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 SYT1P21579 422 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 U2AF2P26368 475 aaKnown RBP eCLIP2.8□□□□□ -1.96
VPS41-206ENST00000418457 DPP6P42658 865 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 TUBP50607 506 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 ZNF75DP51815 510 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 ARSFP54793 590 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 CDH15P55291 814 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 TMPRSS3P57727 454 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 GALNT2Q10471 571 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 PTPN14Q15678 1187 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 BAK1Q16611 211 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 ME3Q16798 604 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 TPD52L1Q16890 204 aaPredicted RBP2.8□□□□□ -1.96
VPS41-206ENST00000418457 EDRF1Q3B7T1 1238 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 Q5PR19 223 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 TEX35Q5T0J7 233 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 UBAP2Q5T6F2 1119 aaKnown RBP2.8□□□□□ -1.96
VPS41-206ENST00000418457 INTS11Q5TA45 600 aaKnown RBP2.8□□□□□ -1.96
VPS41-206ENST00000418457 CCDC30Q5VVM6 783 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 TBC1D9BQ66K14 1250 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 CCDC70Q6NSX1 233 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 ZSCAN25Q6NSZ9 544 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 PARM1Q6UWI2 310 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 PRSS45Q7RTY3 260 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 IRF2BP2Q7Z5L9 587 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 TRIM74Q86UV6 250 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 TRIM73Q86UV7 250 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 MON1AQ86VX9 555 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 HEATR4Q86WZ0 1026 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 PLA2G4DQ86XP0 818 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 TICAM2Q86XR7 235 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 ERC1Q8IUD2 1116 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 ZDHHC23Q8IYP9 409 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 CPXM2Q8N436 756 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 HORMAD2Q8N7B1 307 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 PAF1Q8N7H5 531 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 NAXEQ8NCW5 288 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 KIF18AQ8NI77 898 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 BICD2Q8TD16 824 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 ST8SIA4Q92187 359 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 ATOH1Q92858 354 aaPredicted RBP2.8□□□□□ -1.96
VPS41-206ENST00000418457 ELP4Q96EB1 424 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 ZNF48Q96MX3 618 aaPredicted RBP2.8□□□□□ -1.96
VPS41-206ENST00000418457 FCRL4Q96PJ5 515 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 SEC62Q99442 399 aaKnown RBP2.8□□□□□ -1.96
VPS41-206ENST00000418457 MEIS3Q99687 375 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 WDR77Q9BQA1 342 aaPredicted RBP2.8□□□□□ -1.96
VPS41-206ENST00000418457 FUZQ9BT04 418 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 TNMDQ9H2S6 317 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 CLSTN2Q9H4D0 955 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 SLC32A1Q9H598 525 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 UBN1Q9NPG3 1134 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 BEX4Q9NWD9 120 aaPredicted RBP2.8□□□□□ -1.96
VPS41-206ENST00000418457 HMG20BQ9P0W2 317 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 SEL1LQ9UBV2 794 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 PYCARDQ9ULZ3 195 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 ARHGAP26Q9UNA1 814 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 MTMR6Q9Y217 621 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 CYP46A1Q9Y6A2 500 aa2.8□□□□□ -1.96
VPS41-206ENST00000418457 V9GYY5 206 aaPredicted RBP2.8□□□□□ -1.96
VPS41-206ENST00000418457 AGLP35573 1532 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 KDRP35968 1356 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 RFX7Q2KHR2 1363 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 CACNA1IQ9P0X4 2223 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 ARHGAP10A1A4S6 786 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 GAGE10A6NGK3 116 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 A6NLC8 198 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 B4DGG1 531 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 TEX22C9J3V5 150 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 H0YGN5 161 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 H3BNX3 289 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 HSPB6O14558 160 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 TNPO2O14787 897 aaKnown RBP2.79□□□□□ -1.96
VPS41-206ENST00000418457 TSPAN4O14817 238 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 FIBPO43427 364 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 SLU7O95391 586 aaKnown RBP2.79□□□□□ -1.96
VPS41-206ENST00000418457 MMP3P08254 477 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 FGF2P09038 288 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 HOXB7P09629 217 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 MYZAPP0CAP1 466 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 UBTFL1P0CB47 393 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms