RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 POP4O95707 220 aaKnown RBP20.88■□□□□ 0.93
CASC3-203ENST00000418132 OPRD1P41143 372 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 EIF4HQ15056 248 aaKnown RBP20.88■□□□□ 0.93
CASC3-203ENST00000418132 TAF1AQ15573 450 aaPredicted RBP20.88■□□□□ 0.93
CASC3-203ENST00000418132 MDGA1Q8NFP4 955 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 OR2A12Q8NGT7 310 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 NXPE3Q969Y0 559 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 FAM161BQ96MY7 647 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 NSMCE4AQ9NXX6 385 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 TXNDC16Q9P2K2 825 aa20.88■□□□□ 0.93
CASC3-203ENST00000418132 XIRP2A4UGR9 3374 aa20.87■□□□□ 0.93
CASC3-203ENST00000418132 TRIM49D1C9J1S8 452 aa20.87■□□□□ 0.93
CASC3-203ENST00000418132 ANHXE9PGG2 379 aa20.87■□□□□ 0.93
CASC3-203ENST00000418132 GOLGA8TH3BQL2 631 aa20.87■□□□□ 0.93
CASC3-203ENST00000418132 EIF2DP41214 584 aaKnown RBP20.87■□□□□ 0.93
CASC3-203ENST00000418132 RAD51Q06609 339 aa20.87■□□□□ 0.93
CASC3-203ENST00000418132 GRM3Q14832 879 aa20.87■□□□□ 0.93
CASC3-203ENST00000418132 TERB1Q8NA31 727 aa20.87■□□□□ 0.93
CASC3-203ENST00000418132 STYXQ8WUJ0 223 aa20.87■□□□□ 0.93
CASC3-203ENST00000418132 SMIM14Q96QK8 99 aa20.87■□□□□ 0.93
CASC3-203ENST00000418132 HACD3Q9P035 362 aa20.87■□□□□ 0.93
CASC3-203ENST00000418132 SLC8A2Q9UPR5 921 aa20.87■□□□□ 0.93
CASC3-203ENST00000418132 TTC34A8MYJ7 566 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 SLC7A4O43246 635 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 TIMM44O43615 452 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 PSMA3P25788 255 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 EPHB1P54762 984 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 KDSRQ06136 332 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 HTR4Q13639 388 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 GRTP1Q5TC63 336 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 GLT6D1Q7Z4J2 308 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 TTC8Q8TAM2 541 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 SPOCK2Q92563 424 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 ECHDC3Q96DC8 303 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 SMC6Q96SB8 1091 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 SELENOSQ9BQE4 189 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 MCMBPQ9BTE3 642 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 GGT7Q9UJ14 662 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 NUMBLQ9Y6R0 609 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 H3BQ06 376 aaPredicted RBP20.86■□□□□ 0.93
CASC3-203ENST00000418132 AURKAO14965 403 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 BNIP3LO60238 219 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 MT-ND3P03897 115 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 ZNF140P52738 457 aaPredicted RBP20.86■□□□□ 0.93
CASC3-203ENST00000418132 CSE1LP55060 971 aaKnown RBP20.86■□□□□ 0.93
CASC3-203ENST00000418132 BMPR2Q13873 1038 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 ITPRIPL2Q3MIP1 535 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 STRA8Q7Z7C7 330 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 KDM1BQ8NB78 822 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 CHFRQ96EP1 664 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 ZNF641Q96N77 438 aaPredicted RBP20.86■□□□□ 0.93
CASC3-203ENST00000418132 RBBP8Q99708 897 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 FAM167BQ9BTA0 163 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 EPN3Q9H201 632 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 SUV39H2Q9H5I1 410 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 MAGEE1Q9HCI5 957 aa20.86■□□□□ 0.93
CASC3-203ENST00000418132 SSU72Q9NP77 194 aaKnown RBP20.86■□□□□ 0.93
CASC3-203ENST00000418132 TMEM120BA0PK00 339 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 KRT4P19013 534 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 RECQLP46063 649 aaPredicted RBP20.85■□□□□ 0.93
CASC3-203ENST00000418132 ARSDP51689 593 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 DNAJC3Q13217 504 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 THOC5Q13769 683 aaKnown RBP20.85■□□□□ 0.93
CASC3-203ENST00000418132 MROH9Q5TGP6 573 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 NAIF1Q69YI7 327 aaPredicted RBP20.85■□□□□ 0.93
CASC3-203ENST00000418132 NEPROQ6NW34 567 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 TIFABQ6ZNK6 161 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 SH2D5Q6ZV89 423 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 C4orf33Q8N1A6 199 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 CHST14Q8NCH0 376 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 OR13C4Q8NGS5 318 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 HDAC10Q969S8 669 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 LRCH3Q96II8 777 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 SERAC1Q96JX3 654 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 DNAJC1Q96KC8 554 aaKnown RBP20.85■□□□□ 0.93
CASC3-203ENST00000418132 MFSD1Q9H3U5 465 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 ZDHHC6Q9H6R6 413 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 NLE1Q9NVX2 485 aaPredicted RBP20.85■□□□□ 0.93
CASC3-203ENST00000418132 PLA2G4CQ9UP65 541 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 MUC22E2RYF6 1773 aaPredicted RBP20.85■□□□□ 0.93
CASC3-203ENST00000418132 GRXCR2A6NFK2 248 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 C2orf81A6NN90 581 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.85■□□□□ 0.93
CASC3-203ENST00000418132 BUD23O43709 281 aaKnown RBP20.85■□□□□ 0.93
CASC3-203ENST00000418132 ITGA2BP08514 1039 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 SPRP35270 261 aaPredicted RBP20.85■□□□□ 0.93
CASC3-203ENST00000418132 ABL2P42684 1182 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 ST8SIA6P61647 398 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 TTC30BQ8N4P2 665 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 MDM1Q8TC05 714 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 CALML6Q8TD86 181 aa20.85■□□□□ 0.93
CASC3-203ENST00000418132 A0A0J9YYE9 177 aa20.84■□□□□ 0.93
CASC3-203ENST00000418132 PRPF4O43172 522 aaKnown RBP eCLIP20.84■□□□□ 0.932e-6■□□□□ 9.3
CASC3-203ENST00000418132 RFPL1O75677 317 aa20.84■□□□□ 0.93
CASC3-203ENST00000418132 RPP40O75818 363 aaKnown RBP20.84■□□□□ 0.93
CASC3-203ENST00000418132 TRBC1P01850 177 aa20.84■□□□□ 0.93
CASC3-203ENST00000418132 BMP1P13497 986 aa20.84■□□□□ 0.93
CASC3-203ENST00000418132 LPOP22079 712 aaPredicted RBP20.84■□□□□ 0.93
CASC3-203ENST00000418132 LIMK2P53671 638 aa20.84■□□□□ 0.93
CASC3-203ENST00000418132 SLC18A1P54219 525 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms