RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 UPK3BL2E5RIL1 263 aa13.26□□□□□ -0.29
TNFRSF8-203ENST00000417814 FZD9O00144 591 aa13.26□□□□□ -0.29
TNFRSF8-203ENST00000417814 TMCC1O94876 653 aa13.26□□□□□ -0.29
TNFRSF8-203ENST00000417814 TNFAIP8O95379 198 aa13.26□□□□□ -0.29
TNFRSF8-203ENST00000417814 HAPLN1P10915 354 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF8-203ENST00000417814 HMGB2P26583 209 aaKnown RBP13.26□□□□□ -0.29
TNFRSF8-203ENST00000417814 HARS2P49590 506 aaKnown RBP13.26□□□□□ -0.29
TNFRSF8-203ENST00000417814 MGAT5BQ3V5L5 792 aa13.26□□□□□ -0.29
TNFRSF8-203ENST00000417814 AAGABQ6PD74 315 aa13.26□□□□□ -0.29
TNFRSF8-203ENST00000417814 C16orf87Q6PH81 154 aa13.26□□□□□ -0.29
TNFRSF8-203ENST00000417814 C16orf59Q7L2K0 433 aa13.26□□□□□ -0.29
TNFRSF8-203ENST00000417814 GPR142Q7Z601 462 aa13.26□□□□□ -0.29
TNFRSF8-203ENST00000417814 METTL23Q86XA0 190 aa13.26□□□□□ -0.29
TNFRSF8-203ENST00000417814 FBXO30Q8TB52 745 aa13.26□□□□□ -0.29
TNFRSF8-203ENST00000417814 EFHD1Q9BUP0 239 aa13.26□□□□□ -0.29
TNFRSF8-203ENST00000417814 CABYRO75952 493 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 PAMP19021 973 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 GJA5P36382 358 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 AGTR2P50052 363 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 PKDCCQ504Y2 493 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 SMYD5Q6GMV2 418 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 UGT2A3Q6UWM9 527 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 ZYG11AQ6WRX3 759 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 UNC93AQ86WB7 457 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 SNX29P2Q8IUI4 249 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 ZMIZ2Q8NF64 920 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 BPIFB6Q8NFQ5 453 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 CCDC97Q96F63 343 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 SEMA3CQ99985 751 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 MTG1Q9BT17 334 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 DRC3Q9H069 523 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 GBA3Q9H227 469 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 POLR1BQ9H9Y6 1135 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 GLOD4Q9HC38 313 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 BCAP29Q9UHQ4 241 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 ZNHIT2Q9UHR6 403 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 A0A0J9YYE9 177 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 C1orf232A0A0U1RR37 186 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 A0A1W2PQH9 124 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 HACD1B0YJ81 288 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 SDHDO14521 159 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 PIP5K1BO14986 540 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 SNRPB2P08579 225 aaKnown RBP13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 PHEXP78562 749 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 TRAF2Q12933 501 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 ZNF423Q2M1K9 1284 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 ZRANB3Q5FWF4 1079 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 PCID2Q5JVF3 399 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 FAM117BQ6P1L5 589 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 FASTKD5Q7L8L6 764 aaKnown RBP13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 LSMEM2Q8N112 164 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 CCDC138Q96M89 665 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 EBF1Q9UH73 591 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 FBXW11Q9UKB1 542 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 PCDHGA4Q9Y5G9 962 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 POLR2AP24928 1970 aaKnown RBP13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 TCAF2A6NFQ2 919 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 A8MT66 165 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 CLOCKO15516 846 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 ATP6V1B2P21281 511 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 ENTPD1P49961 510 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 TWF1Q12792 350 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 STX5Q13190 355 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 ZNF235Q14590 738 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 MAPK11Q15759 364 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 ANKDD1AQ495B1 522 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 AGAP9Q5VTM2 703 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 OTUD1Q5VV17 481 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 LINGO4Q6UY18 593 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 CCDC81Q6ZN84 652 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 TTC9BQ8N6N2 239 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 PPTC7Q8NI37 304 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 ZFP14Q9HCL3 533 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 TMCO1Q9UM00 188 aa13.25□□□□□ -0.29
TNFRSF8-203ENST00000417814 NUMA1Q14980 2115 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 COL11A2P13942 1736 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 SOCS2O14508 198 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 PTGESO14684 152 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 DCLK1O15075 740 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 FBXO21O94952 628 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 PRDX3P30048 256 aaKnown RBP13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 MADCAM1Q13477 382 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 MARC1Q5VT66 337 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 STK32CQ86UX6 486 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 LRRTM3Q86VH5 581 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 ELMO1Q92556 727 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 FIG4Q92562 907 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 ZNF419Q96HQ0 510 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 ITCHQ96J02 903 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 NAA50Q9GZZ1 169 aaKnown RBP13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 OSBPL2Q9H1P3 480 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 OAZ3Q9UMX2 235 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 RAD54BQ9Y620 910 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 A0A1B0GTL3 188 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 SLC12A8A0AV02 714 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 DPYSL4O14531 572 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 E2F6O75461 281 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 DAB1O75553 588 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 TRMUO75648 421 aaKnown RBP13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 GSNP06396 782 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms