RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 C1QTNF1Q9BXJ1 281 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 CCL26Q9Y258 94 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 FCF1Q9Y324 198 aaKnown RBP16.85■□□□□ 0.29
SSBP3-205ENST00000417664 CD3EAPO15446 510 aaKnown RBP16.85■□□□□ 0.29
SSBP3-205ENST00000417664 SOCS5O75159 536 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 ARHGEF15O94989 841 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 S1PR4O95977 384 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 GOT2P00505 430 aaKnown RBP16.85■□□□□ 0.29
SSBP3-205ENST00000417664 MYOGP15173 224 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 SLC26A3P40879 764 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 SULT2A1Q06520 285 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 TRAF2Q12933 501 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 SLC5A9Q2M3M2 681 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 CNSTQ6PJW8 725 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 AFTPHQ6ULP2 937 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 CRLF3Q8IUI8 442 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 SLC41A1Q8IVJ1 513 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 GPATCH11Q8N954 259 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 ACVR1CQ8NER5 493 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 OMDQ99983 421 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 LMAN2LQ9H0V9 348 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 SMG9Q9H0W8 520 aaKnown RBP16.85■□□□□ 0.29
SSBP3-205ENST00000417664 NPHS2Q9NP85 383 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 FBXO6Q9NRD1 293 aaPredicted RBP16.85■□□□□ 0.29
SSBP3-205ENST00000417664 CATSPERZQ9NTU4 200 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 INTS10Q9NVR2 710 aaKnown RBP16.85■□□□□ 0.29
SSBP3-205ENST00000417664 PLK2Q9NYY3 685 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 HS3ST2Q9Y278 367 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 VPS9D1Q9Y2B5 631 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 KCTD3Q9Y597 815 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 HCFC2Q9Y5Z7 792 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 CCDC195A0A1B0GUA6 201 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 PFDN6O15212 129 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 KLHL2O95198 593 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 IGSF6O95976 241 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 MT-CO1P00395 513 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 PDHA1P08559 390 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 FGF3P11487 239 aaPredicted RBP16.84■□□□□ 0.29
SSBP3-205ENST00000417664 TAS2R39P59534 338 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 SF3A3Q12874 501 aaKnown RBP eCLIP16.84■□□□□ 0.296e-12■■■■■ 79.1
SSBP3-205ENST00000417664 TYSND1Q2T9J0 566 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 PITRM1Q5JRX3 1037 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 ARMC12Q5T9G4 340 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 FAM45BPQ6NSW5 357 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 RNF135Q8IUD6 432 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 OR13C4Q8NGS5 318 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 TTC8Q8TAM2 541 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 FAM45AQ8TCE6 357 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 IRF7Q92985 503 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 ZNF707Q96C28 371 aaPredicted RBP16.84■□□□□ 0.29
SSBP3-205ENST00000417664 LRRC37BQ96QE4 947 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 SLC2A11Q9BYW1 496 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 MAGEE1Q9HCI5 957 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 SPHK2Q9NRA0 654 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 ABCF3Q9NUQ8 709 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 VWA7Q9Y334 891 aa16.84■□□□□ 0.29
SSBP3-205ENST00000417664 CCDC162PA2VCL2 907 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 H7C0S8 307 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 HTRA2O43464 458 aaPredicted RBP16.83■□□□□ 0.28
SSBP3-205ENST00000417664 FSBPO95073 299 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 PGLSO95336 258 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 ATP5BP06576 529 aaKnown RBP16.83■□□□□ 0.28
SSBP3-205ENST00000417664 DLDP09622 509 aaKnown RBP16.83■□□□□ 0.28
SSBP3-205ENST00000417664 RALBP11234 206 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 CD70P32970 193 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 EPHB1P54762 984 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 IRX4P78413 519 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 IRF9Q00978 393 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 BCL2L1Q07817 233 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 GALNTL6Q49A17 601 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 GRASPQ7Z6J2 395 aaPredicted RBP16.83■□□□□ 0.28
SSBP3-205ENST00000417664 TBC1D1Q86TI0 1168 aaPredicted RBP16.83■□□□□ 0.28
SSBP3-205ENST00000417664 C10orf107Q8IVU9 208 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 MFSD6LQ8IWD5 586 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 MDGA1Q8NFP4 955 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 OR6Y1Q8NGX8 325 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 RMDN2Q96LZ7 410 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 CEP44Q9C0F1 390 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 FAM96AQ9H5X1 160 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 ZNF358Q9NW07 568 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 KCNK4Q9NYG8 393 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 MARK1Q9P0L2 795 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 INTS6Q9UL03 887 aaKnown RBP16.83■□□□□ 0.28
SSBP3-205ENST00000417664 CLEC4EQ9ULY5 219 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 SPO11Q9Y5K1 396 aa16.83■□□□□ 0.28
SSBP3-205ENST00000417664 MYO1CO00159 1063 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 PHGDHO43175 533 aaKnown RBP16.82■□□□□ 0.28
SSBP3-205ENST00000417664 F7P08709 466 aaPredicted RBP16.82■□□□□ 0.28
SSBP3-205ENST00000417664 PIRTP0C851 137 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 SAT1P21673 171 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 KCNA4P22459 653 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 HLA-FP30511 346 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 STC1P52823 247 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 ARFIP2P53365 341 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 SNRPD1P62314 119 aaKnown RBP16.82■□□□□ 0.28
SSBP3-205ENST00000417664 ASPHQ12797 758 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 FAM83EQ2M2I3 478 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 SPRED2Q7Z698 418 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 TMEM25Q86YD3 366 aa16.82■□□□□ 0.28
SSBP3-205ENST00000417664 CEP97Q8IW35 865 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms