RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 ANKRD20A8PQ5CZ79 823 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 ZNF542PQ5EBM4 170 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 ZFYVE27Q5T4F4 411 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 CFAP58Q5T655 872 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 NCBP2-AS2Q69YL0 99 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 KYAT3Q6YP21 454 aaKnown RBP9.68□□□□□ -0.86
LINC01090-201ENST00000415357 Q6ZSR6 202 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 PGBD5Q8N414 524 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 OXR1Q8N573 874 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 EID2Q8N6I1 236 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.68□□□□□ -0.86
LINC01090-201ENST00000415357 KCTD6Q8NC69 237 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 CXorf40AQ8TE69 158 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 RAPGEF5Q92565 580 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 PSKH2Q96QS6 385 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 ERVMER34-1Q9H9K5 563 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 PCDH12Q9NPG4 1184 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 RCOR3Q9P2K3 495 aaPredicted RBP9.68□□□□□ -0.86
LINC01090-201ENST00000415357 DKK3Q9UBP4 350 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 SEPT3Q9UH03 358 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 TFR2Q9UP52 801 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 PCNX2A6NKB5 2137 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 TRPM6Q9BX84 2022 aa9.68□□□□□ -0.86
LINC01090-201ENST00000415357 ANKRD36A6QL64 1941 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 MAGEC1O60732 1142 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 MTA2O94776 668 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 C6P13671 934 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 TNNT1P13805 278 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 SERPINA4P29622 427 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 RXRGP48443 463 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 CSNK1DP48730 415 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 GBE1Q04446 702 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 BCL2L1Q07817 233 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 DNAJC3Q13217 504 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 RFTN1Q14699 578 aaPredicted RBP9.67□□□□□ -0.86
LINC01090-201ENST00000415357 UGP2Q16851 508 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 FAM182AQ5T1J6 154 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 KANSL1Q7Z3B3 1105 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 RAB44Q7Z6P3 723 aaPredicted RBP9.67□□□□□ -0.86
LINC01090-201ENST00000415357 GLRX5Q86SX6 157 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 PQLC3Q8N755 202 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 PAF1Q8N7H5 531 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 RFFLQ8WZ73 363 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 ZNF599Q96NL3 588 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 TUBGCP5Q96RT8 1024 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 CDC6Q99741 560 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 ZNF670Q9BS34 389 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 ATP13A3Q9H7F0 1226 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 MBNL1Q9NR56 388 aaKnown RBP9.67□□□□□ -0.86
LINC01090-201ENST00000415357 GPR27Q9NS67 375 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 UCKL1Q9NWZ5 548 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 FTSJ1Q9UET6 329 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 ATP8A1Q9Y2Q0 1164 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 HS3ST3A1Q9Y663 406 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 CABIN1Q9Y6J0 2220 aa9.67□□□□□ -0.86
LINC01090-201ENST00000415357 SHROOM3Q8TF72 1996 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.66□□□□□ -0.86
LINC01090-201ENST00000415357 LRRD1A4D1F6 860 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 A8MX80 341 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 C1QTNF9BB2RNN3 333 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 TRAFD1O14545 582 aaPredicted RBP9.66□□□□□ -0.86
LINC01090-201ENST00000415357 FPGTO14772 594 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 YKT6O15498 198 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 FFAR2O15552 330 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 TM7SF2O76062 418 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 KRT1P04264 644 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 KRT7P08729 469 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 C1QTNF9P0C862 333 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 CR2P20023 1033 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 KDELR1P24390 212 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 MMP12P39900 470 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 GARSP41250 739 aaKnown RBP9.66□□□□□ -0.86
LINC01090-201ENST00000415357 MAGEA1P43355 309 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 MMP13P45452 471 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 LIG3P49916 1009 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 CLDN6P56747 220 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 AP1S1P61966 158 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 GALNT2Q10471 571 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 TRAF2Q12933 501 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 RALGDSQ12967 914 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 PDE1CQ14123 709 aaPredicted RBP9.66□□□□□ -0.86
LINC01090-201ENST00000415357 FZD2Q14332 565 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 GRM3Q14832 879 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 PAFAH1B3Q15102 231 aaKnown RBP9.66□□□□□ -0.86
LINC01090-201ENST00000415357 PDK2Q15119 407 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 PTPRRQ15256 657 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 IRF4Q15306 451 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 INAVAQ3KP66 663 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 TMEM52BQ4KMG9 183 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 CRTC2Q53ET0 693 aaPredicted RBP9.66□□□□□ -0.86
LINC01090-201ENST00000415357 BRAT1Q6PJG6 821 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 MARCH9Q86YJ5 346 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 RHOT2Q8IXI1 618 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.66□□□□□ -0.86
LINC01090-201ENST00000415357 TP53I13Q8NBR0 393 aaPredicted RBP9.66□□□□□ -0.86
LINC01090-201ENST00000415357 DENND6BQ8NEG7 585 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 PDCD6IPQ8WUM4 868 aaKnown RBP9.66□□□□□ -0.86
LINC01090-201ENST00000415357 ADAMTS14Q8WXS8 1223 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 FAF2Q96CS3 445 aa9.66□□□□□ -0.86
LINC01090-201ENST00000415357 ECHDC3Q96DC8 303 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms