RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 MMP12P39900 470 aa19.44■□□□□ 0.7
UBXN4-202ENST00000415164 ARHGEF7Q14155 803 aa19.44■□□□□ 0.7
UBXN4-202ENST00000415164 PHF19Q5T6S3 580 aa19.44■□□□□ 0.7
UBXN4-202ENST00000415164 BRAT1Q6PJG6 821 aa19.44■□□□□ 0.7
UBXN4-202ENST00000415164 ZSWIM9Q86XI8 627 aa19.44■□□□□ 0.7
UBXN4-202ENST00000415164 SFTPA2Q8IWL1 248 aa19.44■□□□□ 0.7
UBXN4-202ENST00000415164 NEK11Q8NG66 645 aa19.44■□□□□ 0.7
UBXN4-202ENST00000415164 OR56A4Q8NGH8 313 aa19.44■□□□□ 0.7
UBXN4-202ENST00000415164 EXTL1Q92935 676 aa19.44■□□□□ 0.7
UBXN4-202ENST00000415164 CINPQ9BW66 212 aaPredicted RBP19.44■□□□□ 0.7
UBXN4-202ENST00000415164 TRIM4Q9C037 500 aa19.44■□□□□ 0.7
UBXN4-202ENST00000415164 ATP13A3Q9H7F0 1226 aa19.44■□□□□ 0.7
UBXN4-202ENST00000415164 PCDHGA7Q9Y5G6 932 aa19.44■□□□□ 0.7
UBXN4-202ENST00000415164 TSPAN11A1L157 253 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 TMEM202A6NGA9 273 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 TEX33O43247 280 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 EFSO43281 561 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 DAPK3O43293 454 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 PALMO75781 387 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 RECQL5O94762 991 aaPredicted RBP19.43■□□□□ 0.7
UBXN4-202ENST00000415164 ELFN1P0C7U0 828 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 RGRP47804 291 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 ZNF143P52747 638 aaPredicted RBP19.43■□□□□ 0.7
UBXN4-202ENST00000415164 RPL7AP62424 266 aaKnown RBP19.43■□□□□ 0.7
UBXN4-202ENST00000415164 MAP9Q49MG5 647 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 MANEAQ5SRI9 462 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 SRLQ86TD4 932 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 VASH2Q86V25 355 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 PHF13Q86YI8 300 aaPredicted RBP19.43■□□□□ 0.7
UBXN4-202ENST00000415164 UMODL1-AS1Q8N2C9 162 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 HCAR2Q8TDS4 363 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 FUBP1Q96AE4 644 aaKnown RBP19.43■□□□□ 0.7
UBXN4-202ENST00000415164 ZNF641Q96N77 438 aaPredicted RBP19.43■□□□□ 0.7
UBXN4-202ENST00000415164 RBM15Q96T37 977 aaKnown RBP eCLIP19.43■□□□□ 0.71e-7■■■■■ 34.8
UBXN4-202ENST00000415164 CYP4F12Q9HCS2 524 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 FGF22Q9HCT0 170 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 SEPT10Q9P0V9 454 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 LRIT1Q9P2V4 623 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 RNF215Q9Y6U7 377 aa19.43■□□□□ 0.7
UBXN4-202ENST00000415164 PRAMEF33A0A0G2JMD5 474 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 ARHGAP42A6NI28 874 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 WASH4PA8MWX3 477 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 DFFAO00273 331 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 PRAMEF10O60809 474 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 PRAMEF11O60813 436 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 LIPCP11150 499 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 KELP23276 732 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 CCKBRP32239 447 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 PAPOLAP51003 745 aaKnown RBP19.42■□□□□ 0.7
UBXN4-202ENST00000415164 GSCP56915 257 aaPredicted RBP19.42■□□□□ 0.7
UBXN4-202ENST00000415164 BCL2L1Q07817 233 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 ACOX1Q15067 660 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 AMZ1Q400G9 498 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 MON1BQ7L1V2 547 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 ZFAND4Q86XD8 727 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 EXD3Q8N9H8 876 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 TSEN2Q8NCE0 465 aaKnown RBP19.42■□□□□ 0.7
UBXN4-202ENST00000415164 GPR156Q8NFN8 814 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 SGF29Q96ES7 293 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 TUBGCP5Q96RT8 1024 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 CNPY3Q9BT09 278 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 SLC39A8Q9C0K1 460 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 TMEM168Q9H0V1 697 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 DHX35Q9H5Z1 703 aaKnown RBP19.42■□□□□ 0.7
UBXN4-202ENST00000415164 SP110Q9HB58 689 aa19.42■□□□□ 0.7
UBXN4-202ENST00000415164 CHD5Q8TDI0 1954 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 EEF2KO00418 725 aaKnown RBP19.41■□□□□ 0.7
UBXN4-202ENST00000415164 GLB1P16278 677 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 ETV5P41161 510 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 KIAA1024LP59773 190 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 NFKB2Q00653 900 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 BIRC2Q13490 618 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 C14orf28Q4W4Y0 310 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 CERCAMQ5T4B2 595 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 DENND2CQ68D51 928 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 SPECC1LQ69YQ0 1117 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 SPRED1Q7Z699 444 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 CCL4L1Q8NHW4 92 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 USP7Q93009 1102 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 CMKLR1Q99788 373 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 AGPAT1Q99943 283 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 LRRC19Q9H756 370 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 PDFQ9HBH1 243 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 AP4E1Q9UPM8 1137 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 PCDHB11Q9Y5F2 797 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 DGKBQ9Y6T7 804 aa19.41■□□□□ 0.7
UBXN4-202ENST00000415164 TMCO5BA8MYB1 307 aa19.4■□□□□ 0.7
UBXN4-202ENST00000415164 NOBOXO60393 691 aa19.4■□□□□ 0.7
UBXN4-202ENST00000415164 WISP1O95388 367 aa19.4■□□□□ 0.7
UBXN4-202ENST00000415164 PSMA2P25787 234 aa19.4■□□□□ 0.7
UBXN4-202ENST00000415164 NDST2P52849 883 aa19.4■□□□□ 0.7
UBXN4-202ENST00000415164 COPB1P53618 953 aaKnown RBP19.4■□□□□ 0.7
UBXN4-202ENST00000415164 AIF1P55008 147 aa19.4■□□□□ 0.7
UBXN4-202ENST00000415164 LINC00303Q3SY05 128 aa19.4■□□□□ 0.7
UBXN4-202ENST00000415164 ZSCAN1Q8NBB4 408 aa19.4■□□□□ 0.7
UBXN4-202ENST00000415164 ENOX1Q8TC92 643 aaKnown RBP19.4■□□□□ 0.7
UBXN4-202ENST00000415164 JPH3Q8WXH2 748 aaPredicted RBP19.4■□□□□ 0.7
UBXN4-202ENST00000415164 WDR26Q9H7D7 661 aa19.4■□□□□ 0.7
UBXN4-202ENST00000415164 RDH14Q9HBH5 336 aa19.4■□□□□ 0.7
UBXN4-202ENST00000415164 FANCLQ9NW38 375 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms