RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 ZFYVE27Q5T4F4 411 aa16.9■□□□□ 0.3
COL6A2-205ENST00000413758 TXNRD3NBQ6F5E7 133 aa16.9■□□□□ 0.3
COL6A2-205ENST00000413758 PDZD3Q86UT5 571 aa16.9■□□□□ 0.3
COL6A2-205ENST00000413758 FSTL5Q8N475 847 aaPredicted RBP16.9■□□□□ 0.3
COL6A2-205ENST00000413758 NIPA2Q8N8Q9 360 aa16.9■□□□□ 0.3
COL6A2-205ENST00000413758 ZNF564Q8TBZ8 553 aaPredicted RBP16.9■□□□□ 0.3
COL6A2-205ENST00000413758 XPO4Q9C0E2 1151 aaKnown RBP16.9■□□□□ 0.3
COL6A2-205ENST00000413758 SIRPGQ9P1W8 387 aa16.9■□□□□ 0.3
COL6A2-205ENST00000413758 CTTNBP2NLQ9P2B4 639 aa16.9■□□□□ 0.3
COL6A2-205ENST00000413758 PNMA8BQ9ULN7 279 aaPredicted RBP16.9■□□□□ 0.3
COL6A2-205ENST00000413758 PCDHB1Q9Y5F3 818 aa16.9■□□□□ 0.3
COL6A2-205ENST00000413758 PCDHGC4Q9Y5F7 938 aa16.9■□□□□ 0.3
COL6A2-205ENST00000413758 ACACAQ13085 2346 aa16.9■□□□□ 0.3
COL6A2-205ENST00000413758 LRRK1Q38SD2 2015 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 ANKRD11Q6UB99 2663 aaPredicted RBP16.89■□□□□ 0.29
COL6A2-205ENST00000413758 CACNB4O00305 520 aaPredicted RBP16.89■□□□□ 0.29
COL6A2-205ENST00000413758 YY2O15391 372 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 RRP8O43159 456 aaKnown RBP16.89■□□□□ 0.29
COL6A2-205ENST00000413758 USP12O75317 370 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 CPP00450 1065 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 ALPIP09923 528 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 NFKBIAP25963 317 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 ACTN2P35609 894 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 ABCG1P45844 678 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 HK3P52790 923 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 SRP54P61011 504 aaKnown RBP16.89■□□□□ 0.29
COL6A2-205ENST00000413758 ITKQ08881 620 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 MTM1Q13496 603 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 ALG11Q2TAA5 492 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 C6orf132Q5T0Z8 1188 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 MARC1Q5VT66 337 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 DENND2CQ68D51 928 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 LIPIQ6XZB0 460 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 DPPA4Q7L190 304 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 PLA2G15Q8NCC3 412 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 ECHDC3Q96DC8 303 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 TBATAQ96M53 351 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 WDR92Q96MX6 357 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 CLPBQ9H078 707 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 DEF6Q9H4E7 631 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 MOSPD1Q9UJG1 213 aa16.89■□□□□ 0.29
COL6A2-205ENST00000413758 URB1O60287 2271 aaKnown RBP16.89■□□□□ 0.29
COL6A2-205ENST00000413758 APC2O95996 2303 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 FAM208BQ5VWN6 2430 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 CFAP69A5D8W1 941 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 CBFA2T2O43439 604 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 MAFKO60675 156 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 TNFP01375 233 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 CELA2BP08218 269 aaPredicted RBP16.88■□□□□ 0.29
COL6A2-205ENST00000413758 MMP13P45452 471 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 MAXP61244 160 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 SLC25A11Q02978 314 aaKnown RBP16.88■□□□□ 0.29
COL6A2-205ENST00000413758 RALGDSQ12967 914 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 MMRN1Q13201 1228 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 TSR1Q2NL82 804 aaKnown RBP16.88■□□□□ 0.29
COL6A2-205ENST00000413758 CDCP2Q5VXM1 449 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 GKN2Q86XP6 184 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 SLC35F3Q8IY50 421 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 KCTD6Q8NC69 237 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 TPCN2Q8NHX9 752 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 CTNNBL1Q8WYA6 563 aaPredicted RBP16.88■□□□□ 0.29
COL6A2-205ENST00000413758 NAT6Q93015 286 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 NUDCD1Q96RS6 583 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 BOCQ9BWV1 1114 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 NOD2Q9HC29 1040 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 NT5MQ9NPB1 228 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 ZNHIT6Q9NWK9 470 aaKnown RBP16.88■□□□□ 0.29
COL6A2-205ENST00000413758 B4GALT6Q9UBX8 382 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 PADI4Q9UM07 663 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 GPR34Q9UPC5 381 aa16.88■□□□□ 0.29
COL6A2-205ENST00000413758 FREM2Q5SZK8 3169 aa16.87■□□□□ 0.29
COL6A2-205ENST00000413758 A0A087WV48 116 aa16.87■□□□□ 0.29
COL6A2-205ENST00000413758 A0A1W2PQ67 120 aa16.87■□□□□ 0.29
COL6A2-205ENST00000413758 EME2A4GXA9 379 aaPredicted RBP16.87■□□□□ 0.29
COL6A2-205ENST00000413758 TRAFD1O14545 582 aaPredicted RBP16.87■□□□□ 0.29
COL6A2-205ENST00000413758 TLX3O43711 291 aaPredicted RBP16.87■□□□□ 0.29
COL6A2-205ENST00000413758 MPOP05164 745 aa16.87■□□□□ 0.29
COL6A2-205ENST00000413758 TPM1P09493 284 aa16.87■□□□□ 0.29
COL6A2-205ENST00000413758 TGM2P21980 687 aa16.87■□□□□ 0.29
COL6A2-205ENST00000413758 KELP23276 732 aa16.87■□□□□ 0.29
COL6A2-205ENST00000413758 GABREP78334 506 aa16.87■□□□□ 0.29
COL6A2-205ENST00000413758 AGERQ15109 404 aa16.87■□□□□ 0.29
COL6A2-205ENST00000413758 SKOR2Q2VWA4 1001 aaPredicted RBP16.87■□□□□ 0.29
COL6A2-205ENST00000413758 PERM1Q5SV97 790 aa16.87■□□□□ 0.29
COL6A2-205ENST00000413758 PGBD5Q8N414 524 aa16.87■□□□□ 0.29
COL6A2-205ENST00000413758 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL6A2-205ENST00000413758 PCDH19Q8TAB3 1148 aa16.87■□□□□ 0.29
COL6A2-205ENST00000413758 FGF11Q92914 225 aa16.87■□□□□ 0.29
COL6A2-205ENST00000413758 RCOR3Q9P2K3 495 aaPredicted RBP16.87■□□□□ 0.29
COL6A2-205ENST00000413758 GOLGA6CA6NDK9 693 aa16.86■□□□□ 0.29
COL6A2-205ENST00000413758 GOLGA6BA6NDN3 693 aa16.86■□□□□ 0.29
COL6A2-205ENST00000413758 SOCS5O75159 536 aa16.86■□□□□ 0.29
COL6A2-205ENST00000413758 CD48P09326 243 aa16.86■□□□□ 0.29
COL6A2-205ENST00000413758 H2AFZP0C0S5 128 aa16.86■□□□□ 0.29
COL6A2-205ENST00000413758 GOLGA6DP0CG33 693 aa16.86■□□□□ 0.29
COL6A2-205ENST00000413758 CYP2A6P11509 494 aaPredicted RBP16.86■□□□□ 0.29
COL6A2-205ENST00000413758 VIPR1P32241 457 aa16.86■□□□□ 0.29
COL6A2-205ENST00000413758 EIF2S3P41091 472 aaKnown RBP16.86■□□□□ 0.29
COL6A2-205ENST00000413758 CCDC173Q0VFZ6 552 aa16.86■□□□□ 0.29
COL6A2-205ENST00000413758 RBM44Q6ZP01 1051 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms