RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 PRCCQ92733 491 aaPredicted RBP8.57□□□□□ -1.04
SYNE1-211ENST00000413186 LRGUKQ96M69 825 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 DACH2Q96NX9 599 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 HCSTQ9UBK5 93 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 ZNF212Q9UDV6 495 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 STARD13Q9Y3M8 1113 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 GRXCR1A8MXD5 290 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 KDELR3O43731 214 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 ATG13O75143 517 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 NCF2P19878 526 aaPredicted RBP8.56□□□□□ -1.04
SYNE1-211ENST00000413186 HOXA9P31269 272 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 SEMA5AQ13591 1074 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 EIF4HQ15056 248 aaKnown RBP8.56□□□□□ -1.04
SYNE1-211ENST00000413186 LVRNQ6Q4G3 990 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 CES3Q6UWW8 571 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 YTHDF3Q7Z739 585 aaKnown RBP8.56□□□□□ -1.04
SYNE1-211ENST00000413186 CPNE8Q86YQ8 564 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 TMEM130Q8N3G9 435 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 TTC9BQ8N6N2 239 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 CENPIQ92674 756 aaPredicted RBP8.56□□□□□ -1.04
SYNE1-211ENST00000413186 TSGA13Q96PP4 275 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 TMEM109Q9BVC6 243 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 TTLL2Q9BWV7 592 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 OSBPL1AQ9BXW6 950 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 ACSS3Q9H6R3 686 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 CWH43Q9H720 699 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 MANSC1Q9H8J5 431 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 KLC4Q9NSK0 619 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 CTNNAL1Q9UBT7 734 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 CD207Q9UJ71 328 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 GNPTGQ9UJJ9 305 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 RUVBL2Q9Y230 463 aaKnown RBP8.56□□□□□ -1.04
SYNE1-211ENST00000413186 HCFC2Q9Y5Z7 792 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 SMCO3A2RU48 225 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 KRT8P05787 483 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 TCF4P15884 667 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 ARL4DP49703 201 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 PRKAA2P54646 552 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 USP46P62068 366 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 SERINC3Q13530 473 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 PEX6Q13608 980 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 GALNT3Q14435 633 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 HIST2H2ACQ16777 129 aaPredicted RBP8.56□□□□□ -1.04
SYNE1-211ENST00000413186 HIST2H2AA3Q6FI13 130 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 TTC27Q6P3X3 843 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 TSEN2Q8NCE0 465 aaKnown RBP8.56□□□□□ -1.04
SYNE1-211ENST00000413186 PEBP4Q96S96 227 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 FBXO5Q9UKT4 447 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 CDH7Q9ULB5 785 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 PHTF1Q9UMS5 762 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 LRRC72A6NJI9 287 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 TPBGLP0DKB5 382 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 CTPS1P17812 591 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 PSMC3P17980 439 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 CYP2A7P20853 494 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 HALP42357 657 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 SEC24CP53992 1094 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 KBTBD12Q3ZCT8 623 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 ANKRD20A4Q4UJ75 823 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 TEDDM1Q5T9Z0 273 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 RAET1GQ6H3X3 334 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 FAM45BPQ6NSW5 357 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 SCD5Q86SK9 330 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 SLC22A9Q8IVM8 553 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 NKAPQ8N5F7 415 aaKnown RBP8.56□□□□□ -1.04
SYNE1-211ENST00000413186 OR6K2Q8NGY2 324 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 FAM45AQ8TCE6 357 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 LRRN4Q8WUT4 740 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 MRPL38Q96DV4 380 aaKnown RBP8.56□□□□□ -1.04
SYNE1-211ENST00000413186 COPS8Q99627 209 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 SIKE1Q9BRV8 207 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 TRIM15Q9C019 465 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 CXXC1Q9P0U4 656 aaPredicted RBP8.56□□□□□ -1.04
SYNE1-211ENST00000413186 TEKT2Q9UIF3 430 aa8.56□□□□□ -1.04
SYNE1-211ENST00000413186 FCF1Q9Y324 198 aaKnown RBP8.56□□□□□ -1.04
SYNE1-211ENST00000413186 ZNFX1Q9P2E3 1918 aaKnown RBP8.56□□□□□ -1.04
SYNE1-211ENST00000413186 C2orf78A6NCI8 922 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 HEPACAM2A8MVW5 462 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 H3BNC9 293 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 ZW10O43264 779 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 CLASP2O75122 1294 aaKnown RBP8.55□□□□□ -1.04
SYNE1-211ENST00000413186 SEC24AO95486 1093 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 KCNA5P22460 613 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 SKIV2L2P42285 1042 aaKnown RBP8.55□□□□□ -1.04
SYNE1-211ENST00000413186 POU4F1Q01851 419 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 RNASEH2BQ5TBB1 312 aaKnown RBP8.55□□□□□ -1.04
SYNE1-211ENST00000413186 OR2AP1Q8NGE2 309 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 OR4L1Q8NH43 312 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 CCDC138Q96M89 665 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 OSGEPL1Q9H4B0 414 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 ZNF576Q9H609 170 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 EDDM13A0A1B0GTR0 161 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 FAM237BA0A1B0GVD1 139 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 PDZK1P1A8MUH7 402 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 A8MX80 341 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 RPP40O75818 363 aaKnown RBP8.55□□□□□ -1.04
SYNE1-211ENST00000413186 ABLIM3O94929 683 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 BAG2O95816 211 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 FTH1P02794 183 aa8.55□□□□□ -1.04
SYNE1-211ENST00000413186 DGKAP23743 735 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms