RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 DNAJC18Q9H819 358 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 SMPD4Q9NXE4 827 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 VAV3Q9UKW4 847 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 LTN1O94822 1766 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 SDR42E2A6NKP2 422 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 KATNA1O75449 491 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 OAS1P00973 400 aaKnown RBP8.54□□□□□ -1.04
PBRM1-209ENST00000412587 BDNFP23560 247 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 HOXD13P35453 343 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 HTR2BP41595 481 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 SLC18A1P54219 525 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 MARSP56192 900 aaKnown RBP8.54□□□□□ -1.04
PBRM1-209ENST00000412587 BNIP2Q12982 314 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 PHKG1Q16816 387 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 SLC39A12Q504Y0 691 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 CCNYL2Q5T2Q4 361 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 SPRYD7Q5W111 196 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 PLET1Q6UQ28 207 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 HERC6Q8IVU3 1022 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 HS6ST3Q8IZP7 471 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 FAR2Q96K12 515 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 CIB1Q99828 191 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 IL1RL2Q9HB29 575 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 CPNE5Q9HCH3 593 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 CATSPERZQ9NTU4 200 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 ZDHHC7Q9NXF8 308 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 MTRRQ9UBK8 725 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 V9GYQ6 96 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 E2F8A0AVK6 867 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 FAM20BO75063 409 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 NUMBP49757 651 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 CRYBB1P53674 252 aaPredicted RBP8.54□□□□□ -1.04
PBRM1-209ENST00000412587 RHOAP61586 193 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 SLC6A3Q01959 620 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 IL23RQ5VWK5 629 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 EEF1DP3Q658K8 133 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 WSCD1Q658N2 575 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 NEPROQ6NW34 567 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 ABHD15Q6UXT9 468 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 ADCK2Q7Z695 626 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 PPTC7Q8NI37 304 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 NRG4Q8WWG1 115 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 SERPINB11Q96P15 392 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 FERD3LQ96RJ6 166 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 APOL2Q9BQE5 337 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 CIPCQ9C0C6 399 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 PNPLA8Q9NP80 782 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 PACSIN3Q9UKS6 424 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 E5RJQ4 531 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 CBX4O00257 560 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 SLC22A1O15245 554 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 TCEA3O75764 348 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 PIK3R1P27986 724 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 ETV1P50549 477 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 CCL23P55773 120 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 WDR4P57081 412 aaKnown RBP8.54□□□□□ -1.04
PBRM1-209ENST00000412587 PPP2R2BQ00005 443 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 MIIPQ5JXC2 388 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 TBC1D19Q8N5T2 526 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 LEMD2Q8NC56 503 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 EPS8L1Q8TE68 723 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 PMEPA1Q969W9 287 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 MSANTD3Q96H12 275 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 FAM105AQ9NUU6 356 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 RBM22Q9NW64 420 aaKnown RBP eCLIP8.54□□□□□ -1.04
PBRM1-209ENST00000412587 CD274Q9NZQ7 290 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 NUP50Q9UKX7 468 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 NOX1Q9Y5S8 564 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 H7C2Y5 167 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 ONECUT3O60422 494 aaPredicted RBP8.54□□□□□ -1.04
PBRM1-209ENST00000412587 RFPL2O75678 378 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 GJB1P08034 283 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 PSKH1P11801 424 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 PTPN1P18031 435 aaKnown RBP8.54□□□□□ -1.04
PBRM1-209ENST00000412587 HNF4AP41235 474 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 NKX2-5P52952 324 aaPredicted RBP8.54□□□□□ -1.04
PBRM1-209ENST00000412587 SQLEQ14534 574 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 ZNF284Q2VY69 593 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 ZC3H12BQ5HYM0 836 aaKnown RBP8.54□□□□□ -1.04
PBRM1-209ENST00000412587 HYIQ5T013 277 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 SIGIRRQ6IA17 410 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 C16orf46Q6P387 395 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 CAND1Q86VP6 1230 aaKnown RBP8.54□□□□□ -1.04
PBRM1-209ENST00000412587 RASAL3Q86YV0 1011 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 FAM109AQ8N4B1 249 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 C4orf32Q8N8J7 132 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 MAELQ96JY0 434 aaKnown RBP8.54□□□□□ -1.04
PBRM1-209ENST00000412587 ULBP1Q9BZM6 244 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 LRRC40Q9H9A6 602 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 FANCFQ9NPI8 374 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 SLC25A13Q9UJS0 675 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 ST3GAL5Q9UNP4 418 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 PCDHA3Q9Y5H8 950 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 PEAK1Q9H792 1746 aa8.54□□□□□ -1.04
PBRM1-209ENST00000412587 SUPT3HB4E1H0 165 aa8.53□□□□□ -1.04
PBRM1-209ENST00000412587 ZMPSTE24O75844 475 aa8.53□□□□□ -1.04
PBRM1-209ENST00000412587 IFNA7P01567 189 aa8.53□□□□□ -1.04
PBRM1-209ENST00000412587 LTFP02788 710 aa8.53□□□□□ -1.04
PBRM1-209ENST00000412587 PRDX6P30041 224 aa8.53□□□□□ -1.04
PBRM1-209ENST00000412587 CD52P31358 61 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms