RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 TAB2Q9NYJ8 693 aa14.34□□□□□ -0.11
HLA-DQB2-229ENST00000411527 LRIT1Q9P2V4 623 aa14.34□□□□□ -0.11
HLA-DQB2-229ENST00000411527 UBA2Q9UBT2 640 aaPredicted RBP14.34□□□□□ -0.11
HLA-DQB2-229ENST00000411527 ATP8A1Q9Y2Q0 1164 aa14.34□□□□□ -0.11
HLA-DQB2-229ENST00000411527 AHCTF1Q8WYP5 2266 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TMEM202A6NGA9 273 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 WASH4PA8MWX3 477 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 J3KR12 359 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CACNB4O00305 520 aaPredicted RBP14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 PNLIPP16233 465 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SOX5P35711 763 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 MMP12P39900 470 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 ETV5P41161 510 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 KLK7P49862 253 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 MAPK10P53779 464 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 POLR2FP61218 127 aaKnown RBP14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 NFKB2Q00653 900 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 C14orf28Q4W4Y0 310 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CERCAMQ5T4B2 595 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TRIM72Q6ZMU5 477 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SPRED1Q7Z699 444 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 VASH2Q86V25 355 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 ZSWIM9Q86XI8 627 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 ZSCAN1Q8NBB4 408 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 OR56A4Q8NGH8 313 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 USP7Q93009 1102 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 FUBP1Q96AE4 644 aaKnown RBP14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TMEM159Q96B96 161 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CMKLR1Q99788 373 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 DPEP2Q9H4A9 486 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 STARD5Q9NSY2 213 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 DACH1Q9UI36 760 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 MOSPD1Q9UJG1 213 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 FZD10Q9ULW2 581 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 PCDHB11Q9Y5F2 797 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 RNF215Q9Y6U7 377 aa14.33□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SIGLEC16A6NMB1 481 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 B4DGG1 531 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CCP110O43303 1012 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 RECQL5O94762 991 aaPredicted RBP14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 FAM87AP0C7U9 286 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 ITGB6P18564 788 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 KELP23276 732 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 EEF1GP26641 437 aaKnown RBP14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 KIAA1024LP59773 190 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 PHF19Q5T6S3 580 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TMPRSS9Q7Z410 1059 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SRLQ86TD4 932 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 C3orf20Q8ND61 904 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TUBGCP5Q96RT8 1024 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TMEM168Q9H0V1 697 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 VPS16Q9H269 839 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CLSTN2Q9H4D0 955 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 FGF22Q9HCT0 170 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 FAM207AQ9NSI2 230 aaPredicted RBP14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 FOXJ2Q9P0K8 574 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 PCDHGA4Q9Y5G9 962 aa14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 ARHGEF17Q96PE2 2063 aaPredicted RBP14.32□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CFAP69A5D8W1 941 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 ANKRD62A6NC57 917 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 FGF10O15520 208 aaPredicted RBP14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 PRAMEF11O60813 436 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CALB1P05937 261 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SFTPCP11686 197 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SERPINA4P29622 427 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 STAT1P42224 750 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 RGRP47804 291 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 ZNF143P52747 638 aaPredicted RBP14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 GSCP56915 257 aaPredicted RBP14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 JAM2P57087 298 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CYP4F2P78329 520 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 HLTFQ14527 1009 aaKnown RBP eCLIP14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TBR1Q16650 682 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CLEC16AQ2KHT3 1053 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SPECC1LQ69YQ0 1117 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 LIPIQ6XZB0 460 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 ATG14Q6ZNE5 492 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 DTX1Q86Y01 620 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 PHF13Q86YI8 300 aaPredicted RBP14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SLITRK4Q8IW52 837 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 PAF1Q8N7H5 531 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CCL4L1Q8NHW4 92 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CELF6Q96J87 481 aaKnown RBP14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 SEMA6CQ9H3T2 930 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 LRRC19Q9H756 370 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 ATP13A3Q9H7F0 1226 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 PDFQ9HBH1 243 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 RDH14Q9HBH5 336 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 CYP4F12Q9HCS2 524 aa14.31□□□□□ -0.12
HLA-DQB2-229ENST00000411527 A0A1W2PQC6 194 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 A8MX80 341 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 C9orf172C9J069 976 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TERTO14746 1132 aaKnown RBP14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 TNFRSF10CO14798 259 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 EPHB6O15197 1021 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 B4GAT1O43505 415 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 NUDT21O43809 227 aaKnown RBP14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 PALMO75781 387 aa14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 HOXC4P09017 264 aaPredicted RBP14.3□□□□□ -0.12
HLA-DQB2-229ENST00000411527 ELFN1P0C7U0 828 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms