RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 GAGE12FP0CL80 117 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 GAGE12GP0CL81 117 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 GAGE12IP0CL82 117 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 RXRAP19793 462 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 S1PR1P21453 382 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 CORO1AP31146 461 aaKnown RBP1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 STX2P32856 288 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 DCTP40126 519 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 CSRP3P50461 194 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 HDAC4P56524 1084 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 GNB1P62873 340 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 CHRNDQ07001 517 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 GAGE1Q13065 139 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 GAGE4Q13068 117 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 CHAF1AQ13111 956 aaPredicted RBP1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 PUM3Q15397 648 aaKnown RBP1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 TIGD6Q17RP2 521 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 CCDC96Q2M329 555 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 C2orf68Q2NKX9 166 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 ZNF876PQ49A33 203 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 ACCSLQ4AC99 568 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 ATP13A5Q4VNC0 1218 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 FAM72AQ5TYM5 149 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 IRAK1BP1Q5VVH5 260 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 FAM72DQ6L9T8 149 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 FAM53AQ6NSI3 398 aaPredicted RBP1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 FBXO46Q6PJ61 603 aaPredicted RBP1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 C15orf39Q6ZRI6 1047 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 NFE4Q86UQ8 179 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 FAM72BQ86X60 149 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 WDR63Q8IWG1 891 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 SFTPA2Q8IWL1 248 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 C1orf87Q8N0U7 546 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 SPAG16Q8N0X2 631 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 GHDCQ8N2G8 530 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 DNAAF1Q8NEP3 725 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 GJC3Q8NFK1 279 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 TRIM58Q8NG06 486 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 GRAPLQ8TC17 118 aaPredicted RBP1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 HSPH1Q92598 858 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 SNAPC3Q92966 411 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 LGALS12Q96DT0 336 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 ZNF583Q96ND8 569 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 FSD1Q9BTV5 496 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 BARHL1Q9BZE3 327 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 ESRP2Q9H6T0 727 aaKnown RBP1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 SPATS2LQ9NUQ6 558 aaKnown RBP1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 CISD1Q9NZ45 108 aaKnown RBP1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 NDUFAF4Q9P032 175 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 FBXO40Q9UH90 709 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 CD207Q9UJ71 328 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 FAF1Q9UNN5 650 aaPredicted RBP1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 PAM16Q9Y3D7 125 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 A3GALT2U3KPV4 340 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 A0A1W2PNU3 283 aaPredicted RBP1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 TYW5A2RUC4 315 aaKnown RBP1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 PABPN1LA6NDY0 278 aaKnown RBP1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 LILRA5A6NI73 299 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 B9A039 149 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 SYT5O00445 386 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 NR5A2O00482 541 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 WNT9BO14905 357 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 RFPL2O75678 378 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 TUBBP07437 444 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 PRSS1P07477 247 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 ZNF10P21506 573 aaPredicted RBP1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 GNALP38405 381 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 TUBB4BP68371 445 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 GRIK3Q13003 919 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 PPIGQ13427 754 aaKnown RBP eCLIP1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 HLTFQ14527 1009 aaKnown RBP eCLIP1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 TMEM187Q14656 261 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 SLC1A5Q15758 541 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 KRTAP13-3Q3SY46 172 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 DCAF6Q58WW2 860 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 SGO1Q5FBB7 561 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 GPATCH4Q5T3I0 446 aaKnown RBP1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 NCAPH2Q6IBW4 605 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 KCTD8Q6ZWB6 473 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 KRTAP5-5Q701N2 237 aaPredicted RBP1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 MTSS1LQ765P7 747 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 PRSS45Q7RTY3 260 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 SUGP1Q8IWZ8 645 aaKnown RBP1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 ADAD2Q8NCV1 583 aaKnown RBP1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 OR10V1Q8NGI7 309 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 FCAMRQ8WWV6 532 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 NCSTNQ92542 709 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 GOLGA1Q92805 767 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 CMKLR1Q99788 373 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 PYGO2Q9BRQ0 406 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 POLR3CQ9BUI4 534 aaPredicted RBP1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 NUF2Q9BZD4 464 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 WDR12Q9GZL7 423 aaKnown RBP1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 PLEKHA5Q9HAU0 1116 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 G6PC2Q9NQR9 355 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 CNGB3Q9NQW8 809 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 POU2F3Q9UKI9 436 aa1.44□□□□□ -2.18
RNU2-55P-201ENST00000411146 PADI1Q9ULC6 663 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms