RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ANO10Q9NW15 660 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 AURKAIP1Q9NWT8 199 aaPredicted RBP5.03□□□□□ -1.6
LSM5-205ENST00000409952 ARMCX3Q9UH62 379 aaPredicted RBP5.03□□□□□ -1.6
LSM5-205ENST00000409952 IL19Q9UHD0 177 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 GABRQQ9UN88 632 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 KCNK7Q9Y2U2 307 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 RRP15Q9Y3B9 282 aaKnown RBP5.03□□□□□ -1.6
LSM5-205ENST00000409952 NFS1Q9Y697 457 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 UTYO14607 1347 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 RNF103-CHMP3A0A140T963 221 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 EDDM13A0A1B0GTR0 161 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 A0A1W2PR77 199 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 LNP1A1A4G5 178 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 ANXA2P2A6NMY6 339 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 MCIDASD6RGH6 385 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 RNF103O00237 685 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 CES2O00748 559 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 SPRY1O43609 319 aaPredicted RBP5.02□□□□□ -1.61
LSM5-205ENST00000409952 TFP02787 698 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 FESP07332 822 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 ELANEP08246 267 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 SLC2A4P14672 509 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 MMP9P14780 707 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 CTPS1P17812 591 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 TFEBP19484 476 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 TYMPP19971 482 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 GATA3P23771 443 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 APOBEC3AP31941 199 aaPredicted RBP5.02□□□□□ -1.61
LSM5-205ENST00000409952 RABGGTBP53611 331 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 ADPRHP54922 357 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 STX1BP61266 288 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 CXADRP78310 365 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 GPC5P78333 572 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 FAM189BP81408 668 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 ZXDAP98168 799 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 E2F1Q01094 437 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 CXCL9Q07325 125 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 TEFQ10587 303 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 LMAN2Q12907 356 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 NAB2Q15742 525 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 CYP2A13Q16696 494 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 COL28A1Q2UY09 1125 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 SOWAHCQ53LP3 525 aaPredicted RBP5.02□□□□□ -1.61
LSM5-205ENST00000409952 TREML2Q5T2D2 321 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 DENND2CQ68D51 928 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 PPP1R21Q6ZMI0 780 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 GBP6Q6ZN66 633 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 LRRC55Q6ZSA7 311 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 SEPT14Q6ZU15 432 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 WDR63Q8IWG1 891 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 HACE1Q8IYU2 909 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 ANKRD35Q8N283 1001 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 HJURPQ8NCD3 748 aaPredicted RBP5.02□□□□□ -1.61
LSM5-205ENST00000409952 GDPD5Q8WTR4 605 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 LPGAT1Q92604 370 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 AKAP1Q92667 903 aaKnown RBP eCLIP5.02□□□□□ -1.61
LSM5-205ENST00000409952 MOAP1Q96BY2 351 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 INTS14Q96SY0 518 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 ZNF341Q9BYN7 854 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 SLC5A7Q9GZV3 580 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 PLEKHA4Q9H4M7 779 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 LIN28AQ9H9Z2 209 aaKnown RBP5.02□□□□□ -1.61
LSM5-205ENST00000409952 ACTR3BQ9P1U1 418 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 DUSP12Q9UNI6 340 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 SH2B3Q9UQQ2 575 aa5.02□□□□□ -1.61
LSM5-205ENST00000409952 A0A087WV48 116 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 FAM237AA0A1B0GTK4 181 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 TMEM247A6NEH6 219 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 TTC34A8MYJ7 566 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 KDM4EB2RXH2 506 aaPredicted RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 NPIPB11E5RHQ5 1161 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 IFIT3O14879 490 aaKnown RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 CYP27B1O15528 508 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 TLR2O60603 784 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 BCAS2O75934 225 aaPredicted RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 CNTN5O94779 1100 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 CBX6O95503 412 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 TRUB2O95900 331 aaKnown RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 ONECUT2O95948 504 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 ZFYP08048 801 aaPredicted RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 IL6RP08887 468 aaPredicted RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 HMOX1P09601 288 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 PPP3CBP16298 524 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 IL7RP16871 459 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 TACR2P21452 398 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 NDUFS1P28331 727 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 TNFRSF8P28908 595 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 HOXA11P31270 313 aaPredicted RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 HIBADHP31937 336 aaKnown RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 ACVRL1P37023 503 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 STAT6P42226 847 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 SKIV2L2P42285 1042 aaKnown RBP5.01□□□□□ -1.61
LSM5-205ENST00000409952 MATR3P43243 847 aaKnown RBP eCLIP5.01□□□□□ -1.61
LSM5-205ENST00000409952 SUOXP51687 545 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 TPTEP56180 551 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 HHEXQ03014 270 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 KLHL30Q0D2K2 578 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 NPRL3Q12980 569 aa5.01□□□□□ -1.61
LSM5-205ENST00000409952 PPIGQ13427 754 aaKnown RBP eCLIP5.01□□□□□ -1.613e-8■□□□□ 9.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms