RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 GAREM1Q9H706 876 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 FZD3Q9NPG1 666 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 KCTD5Q9NXV2 234 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 DLL3Q9NYJ7 618 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 KLHL8Q9P2G9 620 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-205ENST00000409810 RPL26L1Q9UNX3 145 aaKnown RBP10.97□□□□□ -0.65
CHMP3-205ENST00000409810 SNX11Q9Y5W9 270 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 SLCO1B1Q9Y6L6 691 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 PCNX2A6NKB5 2137 aa10.97□□□□□ -0.65
CHMP3-205ENST00000409810 TLR4O00206 839 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 TOR1BO14657 336 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 MMP20O60882 483 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 WNT1P04628 370 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 ZNF883P0CG24 379 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 THEGLP0DJG4 465 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 MSNP26038 577 aaKnown RBP10.96□□□□□ -0.65
CHMP3-205ENST00000409810 VIPR1P32241 457 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 CD86P42081 329 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 CTSKP43235 329 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 RABIFP47224 123 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 CCT8P50990 548 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 EIF3EP60228 445 aaKnown RBP10.96□□□□□ -0.65
CHMP3-205ENST00000409810 NIPAL4Q0D2K0 466 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 SLC14A1Q13336 389 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 ARHGEF7Q14155 803 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 FGL2Q14314 439 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 SUZ12Q15022 739 aaKnown RBP10.96□□□□□ -0.65
CHMP3-205ENST00000409810 HLA-BQ31612 363 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 MEI1Q5TIA1 1274 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 ITPRIPL1Q6GPH6 555 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 KYAT3Q6YP21 454 aaKnown RBP10.96□□□□□ -0.65
CHMP3-205ENST00000409810 PTAR1Q7Z6K3 402 aaPredicted RBP10.96□□□□□ -0.65
CHMP3-205ENST00000409810 ARRDC2Q8TBH0 407 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 RMDN1Q96DB5 314 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 TEKT5Q96M29 485 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 ADGRE3Q9BY15 652 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 CEP41Q9BYV8 373 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 CARD9Q9H257 536 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 ERVMER34-1Q9H9K5 563 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 PCDH9Q9HC56 1237 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 B4GALT6Q9UBX8 382 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 TRHDEQ9UKU6 1024 aa10.96□□□□□ -0.65
CHMP3-205ENST00000409810 DNAH14Q0VDD8 3507 aa10.96□□□□□ -0.66
CHMP3-205ENST00000409810 PSMD11O00231 422 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 FZD6O60353 706 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 PRKCGP05129 697 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 RBP3P10745 1247 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 ZNF30P17039 623 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 ITIH2P19823 946 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 ARRB1P49407 418 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-205ENST00000409810 LIG3P49916 1009 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 NXPH1P58417 271 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 SKOR1P84550 965 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 BNC1Q01954 994 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 CCDC173Q0VFZ6 552 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 RALGDSQ12967 914 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 PTK2BQ14289 1009 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 LRRC14Q15048 493 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 AGERQ15109 404 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 ZNF423Q2M1K9 1284 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 INAVAQ3KP66 663 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 CCDC70Q6NSX1 233 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 AADACL2Q6P093 401 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 DARS2Q6PI48 645 aaKnown RBP10.95□□□□□ -0.66
CHMP3-205ENST00000409810 LIPIQ6XZB0 460 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 GCNT7Q6ZNI0 430 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 PID1Q7Z2X4 250 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 ABI3BPQ7Z7G0 1075 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 CNTD1Q8N815 330 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 LPCAT1Q8NF37 534 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 IFT43Q96FT9 208 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 SCRN2Q96FV2 425 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 IMP4Q96G21 291 aaKnown RBP10.95□□□□□ -0.66
CHMP3-205ENST00000409810 NSMCE3Q96MG7 304 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 PPP1R2P1Q96PQ5 205 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 ELF4Q99607 663 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-205ENST00000409810 FRMD8P1Q9BZ68 369 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-205ENST00000409810 SLC32A1Q9H598 525 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 GLOD4Q9HC38 313 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 TM7SF3Q9NS93 570 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 CHKBQ9Y259 395 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 CA5BQ9Y2D0 317 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 PPIL1Q9Y3C6 166 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 PCDHGB2Q9Y5G2 931 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 DCHS1Q96JQ0 3298 aa10.95□□□□□ -0.66
CHMP3-205ENST00000409810 A0A0J9YYE9 177 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 CAPN8A6NHC0 703 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 KCNK3O14649 394 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 WNT9AO14904 365 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 RAD51BO15315 384 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 KCNN4O15554 427 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 HEXIM1O94992 359 aaKnown RBP10.94□□□□□ -0.66
CHMP3-205ENST00000409810 TRBC1P01850 177 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 MMP2P08253 660 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 RBL1P28749 1068 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 IGFALSP35858 605 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 THOP1P52888 689 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 CLDN2P57739 230 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 WASHC5Q12768 1159 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 KLF1Q13351 362 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms