RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 TCF12Q99081 682 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 HACD3Q9P035 362 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 EMCNQ9ULC0 261 aa4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 OAS3Q9Y6K5 1087 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-203ENST00000409606 SDR42E2A6NKP2 422 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 ANKRD66B4E2M5 251 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 GPR89AB7ZAQ6 455 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 MT-CO1P00395 513 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 GPR89BP0CG08 455 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 TIMP2P16035 220 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 LHCGRP22888 699 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 CTHP32929 405 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 LIMK1P53667 647 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 CBX1P83916 185 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 PDE1BQ01064 536 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 GPS1Q13098 491 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 SEMA3AQ14563 771 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 ITPRIPL2Q3MIP1 535 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 ANKRD20A4Q4UJ75 823 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 CDKL4Q5MAI5 379 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 MARC1Q5VT66 337 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 CWF19L1Q69YN2 538 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 NAPEPLDQ6IQ20 393 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 GET4Q7L5D6 327 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 CHSY1Q86X52 802 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 C17orf82Q86X59 251 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 TP53I13Q8NBR0 393 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 DDHD1Q8NEL9 900 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 OR7D4Q8NG98 312 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 STYXQ8WUJ0 223 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 UBTD2Q8WUN7 234 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 UBXN4Q92575 508 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 LPGAT1Q92604 370 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 TMA16Q96EY4 203 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 GCNAQ96QF7 691 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 RPP25Q9BUL9 199 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 TEX101Q9BY14 249 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 PRSS16Q9NQE7 514 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 SYBUQ9NX95 663 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 GULP1Q9UBP9 304 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 CDYLQ9Y232 598 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 TSC22D4Q9Y3Q8 395 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 K7ESF4 209 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 S1PR4O95977 384 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 RHOCP08134 193 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 SP100P23497 879 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 SLC6A11P48066 632 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 ARL4CP56559 192 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 B4GALNT1Q00973 533 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 ZNF177Q13360 481 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 HIF1AQ16665 826 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 PPP1R3AQ16821 1122 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 SPDYAQ5MJ70 313 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 FAM91A1Q658Y4 838 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 ESRP1Q6NXG1 681 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 ZNF549Q6P9A3 640 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 MACC1Q6ZN28 852 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 HDXQ7Z353 690 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 KANSL1Q7Z3B3 1105 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 CILP2Q8IUL8 1156 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 SFTPA1Q8IWL2 248 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 C12orf76Q8N812 135 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 FAM174AQ8TBP5 190 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 MTBPQ96DY7 904 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 KLF6Q99612 283 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 RBBP8Q99708 897 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 SMG9Q9H0W8 520 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 C10orf88Q9H8K7 445 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 KCNK12Q9HB15 430 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 RYDENQ9NUL5 291 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 CDH22Q9UJ99 828 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 ANAPC5Q9UJX4 755 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 NUDT5Q9UKK9 219 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 MRPS23Q9Y3D9 190 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 STK10O94804 968 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 AGTP01019 485 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 ALDOAP04075 364 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 GSTA1P08263 222 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 COL6A2P12110 1019 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 VIPR2P41587 438 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 WNT3AP56704 352 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 RNASE9P60153 205 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 RPS14P62263 151 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 GALNT1Q10472 559 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 NR1D2Q14995 579 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 MAP9Q49MG5 647 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 ATAT1Q5SQI0 421 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 CES4AQ5XG92 561 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 MBLAC2Q68D91 279 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 SYT13Q7L8C5 426 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 LRRC6Q86X45 466 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 CHCHD4Q8N4Q1 142 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 IL17RCQ8NAC3 791 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 RPRD1AQ96P16 312 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 XPO6Q96QU8 1125 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 RBM15Q96T37 977 aaKnown RBP eCLIP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 ZFP14Q9HCL3 533 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 FBRSL1Q9HCM7 1045 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 DNAJC17Q9NVM6 304 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms