RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 SDCBP2Q9H190 292 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 ADNPQ9H2P0 1102 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 PIH1D1Q9NWS0 290 aaKnown RBP16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 ARMCX1Q9P291 453 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 INSIG1O15503 277 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 MFSD11O43934 449 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 ULK1O75385 1050 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 HNRNPCP07910 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 MAXP61244 160 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 CYP20A1Q6UW02 462 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 CLEC20AQ6ZU45 233 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 DNAJB7Q7Z6W7 309 aaPredicted RBP16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 DEFB107AQ8IZN7 70 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 PTGR2Q8N8N7 351 aaPredicted RBP16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 CNBD2Q96M20 576 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 NSMCE2Q96MF7 247 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 CDH19Q9H159 772 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 ALG9Q9H6U8 611 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 IGSF9Q9P2J2 1179 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 SCML2Q9UQR0 700 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 GLYATL1P3A0A0U1RQE8 302 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 CCDC154A6NI56 674 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 PITPNM1O00562 1244 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 GUCA1AP43080 201 aaPredicted RBP16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 CACNA2D1P54289 1103 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 ADGRF1Q5T601 910 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 PACS1Q6VY07 963 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 SYT12Q8IV01 421 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 CORO2BQ9UQ03 480 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 RAP2CQ9Y3L5 183 aa16.85■□□□□ 0.29
PCDHA13-202ENST00000409494 MEI4A8MW99 385 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 PABPC1P11940 636 aaKnown RBP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 LMO2P25791 158 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 FAM98BQ52LJ0 330 aaKnown RBP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 LRRC74BQ6ZQY2 392 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 ZNF572Q7Z3I7 529 aaPredicted RBP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 ARL14EPQ8N8R7 260 aaPredicted RBP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 C10orf88Q9H8K7 445 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 ZMYND8Q9ULU4 1186 aaPredicted RBP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 TBC1D3DA0A087WVF3 549 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 TBC1D3IA0A087WXS9 549 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 TBC1D3EA0A087X179 549 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 TBC1D3KA0A087X1G2 549 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 DYTNA2CJ06 578 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 TBC1D3FA6NER0 549 aaPredicted RBP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 TBC1D3LB9A6J9 549 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 ATG13O75143 517 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 TBC1D3HP0C7X1 549 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 GABRB2P47870 512 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 PFKFB4Q16877 469 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 TBC1D3GQ6DHY5 549 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 TBC1D3CQ6IPX1 549 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 TBC1D3Q8IZP1 549 aaPredicted RBP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 ZNF461Q8TAF7 563 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 ZNF296Q8WUU4 475 aaPredicted RBP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 SYBUQ9NX95 663 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 TRPC4Q9UBN4 977 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 ZNHIT2Q9UHR6 403 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 NUP98P52948 1817 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 ILVBLA1L0T0 632 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 NEK3P51956 506 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 TBL3Q12788 808 aaKnown RBP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 GRSF1Q12849 480 aaKnown RBP eCLIP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 ADRM1Q16186 407 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 ZFP1Q6P2D0 407 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 IL27RAQ6UWB1 636 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 DLK2Q6UY11 383 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 R3HCC1LQ7Z5L2 792 aaKnown RBP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 ZC3H3Q8IXZ2 948 aaKnown RBP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 CFAP52Q8N1V2 620 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 BRSK1Q8TDC3 778 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 ARNTL2Q8WYA1 636 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 CD101Q93033 1021 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 OTUB2Q96DC9 234 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 HHIPL1Q96JK4 782 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 ZNF514Q96K75 400 aaPredicted RBP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 NR1H4Q96RI1 486 aaPredicted RBP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 CAAP1Q9H8G2 361 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 SOD2P04179 222 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 GBE1Q04446 702 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 RGS1Q08116 209 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 LIPMQ5VYY2 423 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 ZNF544Q6NX49 715 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 PRSS55Q6UWB4 352 aaPredicted RBP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 UGT2B28Q9BY64 529 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 FAM83DQ9H4H8 585 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 MINDY3Q9H8M7 445 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 RABGEF1Q9UJ41 708 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 ZNF180Q9UJW8 692 aa16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 PNMA8BQ9ULN7 279 aaPredicted RBP16.84■□□□□ 0.29
PCDHA13-202ENST00000409494 AVILO75366 819 aa16.83■□□□□ 0.29
PCDHA13-202ENST00000409494 PNLIPRP1P54315 467 aa16.83■□□□□ 0.29
PCDHA13-202ENST00000409494 NAGLUP54802 743 aa16.83■□□□□ 0.29
PCDHA13-202ENST00000409494 C21orf59P57076 290 aa16.83■□□□□ 0.29
PCDHA13-202ENST00000409494 KCTD19Q17RG1 926 aaPredicted RBP16.83■□□□□ 0.29
PCDHA13-202ENST00000409494 MFSD5Q6N075 450 aa16.83■□□□□ 0.29
PCDHA13-202ENST00000409494 KRT73Q86Y46 540 aa16.83■□□□□ 0.29
PCDHA13-202ENST00000409494 ZNF516Q92618 1163 aa16.83■□□□□ 0.29
PCDHA13-202ENST00000409494 USP6NLQ92738 828 aa16.83■□□□□ 0.29
PCDHA13-202ENST00000409494 PAWRQ96IZ0 340 aaKnown RBP16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms