RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 USP1O94782 785 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 PRNPP04156 253 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 NTSR1P30989 418 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 FAM193AP78312 1265 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 PTPRCAPQ14761 206 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 EFTUD2Q15029 972 aaKnown RBP eCLIP16.9■□□□□ 0.36e-9■■□□□ 12.6
SSB-202ENST00000409333 E2F5Q15329 346 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 ZNF805Q5CZA5 627 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 SPANXN3Q5MJ09 141 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 GLT6D1Q7Z4J2 308 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 MMAAQ8IVH4 418 aaKnown RBP16.9■□□□□ 0.3
SSB-202ENST00000409333 TXNDC5Q8NBS9 432 aaKnown RBP16.9■□□□□ 0.3
SSB-202ENST00000409333 KCNV2Q8TDN2 545 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 PTCD2Q8WV60 388 aaKnown RBP16.9■□□□□ 0.3
SSB-202ENST00000409333 SPOCK2Q92563 424 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 GABRG3Q99928 467 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 VIPAS39Q9H9C1 493 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 RABGEF1Q9UJ41 708 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 PHTF1Q9UMS5 762 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 DOCK9Q9BZ29 2069 aa16.9■□□□□ 0.3
SSB-202ENST00000409333 KRBA1A5PL33 1030 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 MROH6A6NGR9 719 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 MAN2B1O00754 1011 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 SPAG6O75602 509 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 SLC4A1P02730 911 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 C1QAP02745 245 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 GSTA2P09210 222 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 SEMG2Q02383 582 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 CAMK2GQ13555 558 aaPredicted RBP16.89■□□□□ 0.3
SSB-202ENST00000409333 TSTD2Q5T7W7 516 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 KIAA1211LQ6NV74 962 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 ESRP1Q6NXG1 681 aaKnown RBP16.89■□□□□ 0.3
SSB-202ENST00000409333 BRAT1Q6PJG6 821 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 MICALCLQ6ZW33 695 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 CACUL1Q86Y37 369 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 TMIEQ8NEW7 156 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 RPLP0P6Q8NHW5 317 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 TREX1Q9NSU2 369 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 ZNF711Q9Y462 761 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 PLXNB3Q9ULL4 1909 aa16.89■□□□□ 0.3
SSB-202ENST00000409333 CAPN8A6NHC0 703 aa16.89■□□□□ 0.29
SSB-202ENST00000409333 NPIPB15A6NHN6 443 aaPredicted RBP16.89■□□□□ 0.29
SSB-202ENST00000409333 C16orf96A6NNT2 1141 aa16.89■□□□□ 0.29
SSB-202ENST00000409333 A8MX80 341 aa16.89■□□□□ 0.29
SSB-202ENST00000409333 IL1BP01584 269 aa16.89■□□□□ 0.29
SSB-202ENST00000409333 HNF1BP35680 557 aa16.89■□□□□ 0.29
SSB-202ENST00000409333 MRPS21P82921 87 aaKnown RBP16.89■□□□□ 0.29
SSB-202ENST00000409333 ALS2CLQ60I27 953 aa16.89■□□□□ 0.29
SSB-202ENST00000409333 ZNF852Q6ZMS4 543 aa16.89■□□□□ 0.29
SSB-202ENST00000409333 PARS2Q7L3T8 475 aaKnown RBP16.89■□□□□ 0.29
SSB-202ENST00000409333 LYSMD3Q7Z3D4 306 aa16.89■□□□□ 0.29
SSB-202ENST00000409333 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.89■□□□□ 0.29
SSB-202ENST00000409333 ATXN2LQ8WWM7 1075 aaKnown RBP16.89■□□□□ 0.29
SSB-202ENST00000409333 ARRDC3Q96B67 414 aa16.89■□□□□ 0.29
SSB-202ENST00000409333 ACSS3Q9H6R3 686 aa16.89■□□□□ 0.29
SSB-202ENST00000409333 MAGEE1Q9HCI5 957 aa16.89■□□□□ 0.29
SSB-202ENST00000409333 FBXL21Q9UKT6 434 aa16.89■□□□□ 0.29
SSB-202ENST00000409333 FAM169AQ9Y6X4 670 aa16.89■□□□□ 0.29
SSB-202ENST00000409333 PLXNA2O75051 1894 aa16.89■□□□□ 0.29
SSB-202ENST00000409333 A0A1W2PQ67 120 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 AGPSO00116 658 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 CCL22O00626 93 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 SYNCRIPO60506 623 aaKnown RBP16.88■□□□□ 0.29
SSB-202ENST00000409333 HOXB2P14652 356 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 COL9A1P20849 921 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 STX2P32856 288 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 PSMD8P48556 350 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 ZNF140P52738 457 aaPredicted RBP16.88■□□□□ 0.29
SSB-202ENST00000409333 PRKCQQ04759 706 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 ZNF844Q08AG5 666 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 IFFO1Q0D2I5 559 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 TAF1AQ15573 450 aaPredicted RBP16.88■□□□□ 0.29
SSB-202ENST00000409333 CNGA3Q16281 694 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 UGP2Q16851 508 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 LONRF1Q17RB8 773 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 KBTBD12Q3ZCT8 623 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 FBXO43Q4G163 708 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 SDE2Q6IQ49 451 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 TRMT11Q7Z4G4 463 aaKnown RBP16.88■□□□□ 0.29
SSB-202ENST00000409333 TSPAN33Q86UF1 283 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 ZNF687Q8N1G0 1237 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 OR13C4Q8NGS5 318 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 OR13J1Q8NGT2 312 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 EPS8L3Q8TE67 593 aaKnown RBP16.88■□□□□ 0.29
SSB-202ENST00000409333 EID2BQ96D98 161 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 ASB2Q96Q27 587 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 MCCC1Q96RQ3 725 aaPredicted RBP16.88■□□□□ 0.29
SSB-202ENST00000409333 SMYD2Q9NRG4 433 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 MOCS1Q9NZB8 636 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 DKK3Q9UBP4 350 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 WNT16Q9UBV4 365 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 PPIL1Q9Y3C6 166 aa16.88■□□□□ 0.29
SSB-202ENST00000409333 EXOC1LA0A1B0GW35 172 aa16.87■□□□□ 0.29
SSB-202ENST00000409333 UPK3BL1B0FP48 263 aa16.87■□□□□ 0.29
SSB-202ENST00000409333 UPK3BL2E5RIL1 263 aa16.87■□□□□ 0.29
SSB-202ENST00000409333 PLK4O00444 970 aa16.87■□□□□ 0.29
SSB-202ENST00000409333 ATP8B1O43520 1251 aa16.87■□□□□ 0.29
SSB-202ENST00000409333 ALDH1A2O94788 518 aa16.87■□□□□ 0.29
SSB-202ENST00000409333 CRTAMO95727 393 aa16.87■□□□□ 0.29
SSB-202ENST00000409333 TIMP2P16035 220 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms