RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 SCRN2Q96FV2 425 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 MCCC1Q96RQ3 725 aaPredicted RBP20.4■□□□□ 0.86
PTCD3-202ENST00000409326 OSBPL9Q96SU4 736 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 TMEM121Q9BTD3 319 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 NUSAP1Q9BXS6 441 aaKnown RBP20.4■□□□□ 0.86
PTCD3-202ENST00000409326 GBA3Q9H227 469 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 B4GALT6Q9UBX8 382 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 RSPH14Q9UHP6 348 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 SNX12Q9UMY4 172 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 SLC6A14Q9UN76 642 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 KNL1Q8NG31 2342 aa20.39■□□□□ 0.86
PTCD3-202ENST00000409326 C5orf60A6NFR6 353 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 OPHN1O60890 802 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 TM7SF2O76062 418 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 CYP2A6P11509 494 aaPredicted RBP20.39■□□□□ 0.85
PTCD3-202ENST00000409326 HNRNPA2B1P22626 353 aaKnown RBP20.39■□□□□ 0.85
PTCD3-202ENST00000409326 VIPR1P32241 457 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 EPHB1P54762 984 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 IRX4P78413 519 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 SEMG2Q02383 582 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 SGCGQ13326 291 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 TEAD4Q15561 434 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 C12orf50Q8NA57 414 aaPredicted RBP20.39■□□□□ 0.85
PTCD3-202ENST00000409326 TMEM145Q8NBT3 493 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 LPCAT1Q8NF37 534 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 CCDC110Q8TBZ0 833 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 TRIB3Q96RU7 358 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 WDR24Q96S15 920 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 AASDHPPTQ9NRN7 309 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 FAM153AQ9UHL3 310 aa20.39■□□□□ 0.85
PTCD3-202ENST00000409326 TTC7AQ9ULT0 858 aaPredicted RBP20.39■□□□□ 0.85
PTCD3-202ENST00000409326 A0A0J9YYE9 177 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 LNP1A1A4G5 178 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 NPIPB15A6NHN6 443 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-202ENST00000409326 CES2O00748 559 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 WNT9AO14904 365 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 PAK4O96013 591 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-202ENST00000409326 TRBC1P01850 177 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 ELFN1P0C7U0 828 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 C6P13671 934 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 AKT2P31751 481 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 LIG3P49916 1009 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 GDF10P55107 478 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 CDK18Q07002 472 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 PCSK7Q16549 785 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 CCNG2Q16589 344 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 DRICH1Q6PGQ1 229 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-202ENST00000409326 LIPIQ6XZB0 460 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 C17orf53Q8N3J3 647 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-202ENST00000409326 FAM71DQ8N9W8 422 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 DENND6BQ8NEG7 585 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 RTP4Q96DX8 246 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 OXNAD1Q96HP4 312 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-202ENST00000409326 LENG8Q96PV6 779 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-202ENST00000409326 ADGRE3Q9BY15 652 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 FZD3Q9NPG1 666 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 UBP1Q9NZI7 540 aa20.38■□□□□ 0.85
PTCD3-202ENST00000409326 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.38■□□□□ 0.85
PTCD3-202ENST00000409326 A0A1W2PR77 199 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 CAPN8A6NHC0 703 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 F5H423 210 aaPredicted RBP20.37■□□□□ 0.85
PTCD3-202ENST00000409326 PMPCBO75439 489 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 ALPIP09923 528 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 CTPS1P17812 591 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 LHCGRP22888 699 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 CD38P28907 300 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 HOXD11P31277 338 aaPredicted RBP20.37■□□□□ 0.85
PTCD3-202ENST00000409326 STIP1P31948 543 aaKnown RBP20.37■□□□□ 0.85
PTCD3-202ENST00000409326 CSNK1EP49674 416 aaKnown RBP20.37■□□□□ 0.85
PTCD3-202ENST00000409326 MPP3Q13368 585 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 SNX1Q13596 522 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 AGERQ15109 404 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 QPCTQ16769 361 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 KDELC1Q6UW63 502 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 KIAA2013Q8IYS2 634 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 COG1Q8WTW3 980 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 IFT43Q96FT9 208 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 MS4A14Q96JA4 679 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 LYSMD1Q96S90 227 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 KLF6Q99612 283 aaPredicted RBP20.37■□□□□ 0.85
PTCD3-202ENST00000409326 NAPGQ99747 312 aaPredicted RBP20.37■□□□□ 0.85
PTCD3-202ENST00000409326 MYOCQ99972 504 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 GORASP1Q9BQQ3 440 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 C1QTNF7Q9BXJ2 289 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 DNAH14Q0VDD8 3507 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 CFAP54Q96N23 3096 aa20.37■□□□□ 0.85
PTCD3-202ENST00000409326 SCN8AQ9UQD0 1980 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 A8MX80 341 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 ANKRD66B4E2M5 251 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 PGRMC1O00264 195 aaKnown RBP20.36■□□□□ 0.85
PTCD3-202ENST00000409326 VILLO15195 856 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 RAD51BO15315 384 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 GCATO75600 419 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 ANXA9O76027 345 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 HEXIM1O94992 359 aaKnown RBP20.36■□□□□ 0.85
PTCD3-202ENST00000409326 WNT1P04628 370 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 ITGAVP06756 1048 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 SYPP08247 313 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 ENGP17813 658 aa20.36■□□□□ 0.85
PTCD3-202ENST00000409326 TCP1P17987 556 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms