RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ZNF658Q5TYW1 1059 aaPredicted RBP12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 TEX19Q8NA77 164 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 OR4D9Q8NGE8 314 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 KIAA1524Q8TCG1 905 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 FUBP1Q96AE4 644 aaKnown RBP12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 KIAA1143Q96AT1 154 aaPredicted RBP12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 GDAP1L1Q96MZ0 367 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 HAPLN3Q96S86 360 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 ASPSCR1Q9BZE9 553 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 SPRY4Q9C004 299 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 UBE2TQ9NPD8 197 aaPredicted RBP12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 SLC39A1Q9NY26 324 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 TMEM9Q9P0T7 183 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 VPS4AQ9UN37 437 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 PCDHGC3Q9UN70 934 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 SHANK1Q9Y566 2161 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 FBN2P35556 2912 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 EFCAB7A8K855 629 aa12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 KRT38O76015 456 aa12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 TMCC1O94876 653 aa12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 ETFBP38117 255 aa12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 RAB15P59190 212 aa12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 RNASE9P60153 205 aaKnown RBP12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 DCAF12Q5T6F0 453 aa12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 TCTN3Q6NUS6 607 aa12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 FAM129CQ86XR2 697 aa12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 NLGN4XQ8N0W4 816 aa12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 GALNT11Q8NCW6 608 aa12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 NLGN4YQ8NFZ3 816 aaPredicted RBP12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 SPATA32Q96LK8 384 aa12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 TTYH3Q9C0H2 523 aa12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 SPATS2LQ9NUQ6 558 aaKnown RBP12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 PPARGC1AQ9UBK2 798 aaKnown RBP12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 KCNMB2Q9Y691 235 aa12.92□□□□□ -0.34
CHRNA1-203ENST00000409219 RHPN2P1A8MT19 583 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 B4E171 279 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 ZNF202O95125 648 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 PIGNO95427 931 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 F9P00740 461 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 POU3F2P20265 443 aaPredicted RBP12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 MPSTP25325 297 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 COL8A1P27658 744 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 TSPAN7P41732 249 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 SLC25A52Q3SY17 297 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 MANEALQ5VSG8 457 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 NKAIN2Q5VXU1 208 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 C16orf46Q6P387 395 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 GJB7Q6PEY0 223 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 TIPARPQ7Z3E1 657 aaKnown RBP12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 NLRP14Q86W24 1093 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 NRSN1Q8IZ57 195 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 BMPERQ8N8U9 685 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 NETO2Q8NC67 525 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 PATE1Q8WXA2 126 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 RTP4Q96DX8 246 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 HMCESQ96FZ2 354 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 CEP63Q96MT8 703 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 EFHD1Q9BUP0 239 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 SYNCQ9H7C4 482 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 CYP4F12Q9HCS2 524 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 PCDH12Q9NPG4 1184 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 PRDM8Q9NQV8 689 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 RMND1Q9NWS8 449 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 MFHAS1Q9Y4C4 1052 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 TSPAN11A1L157 253 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 PRSS38A1L453 326 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 CACNB4O00305 520 aaPredicted RBP12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 TNFRSF10CO14798 259 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 INSIG1O15503 277 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 ECEL1O95672 775 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 IGSF6O95976 241 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 CCNB1P14635 433 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 TCN2P20062 427 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 XPAP23025 273 aaPredicted RBP12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 MAP4P27816 1152 aaKnown RBP12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 FLT3P36888 993 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 MMP12P39900 470 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 DCTP40126 519 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 MAPKAPK2P49137 400 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 LIG3P49916 1009 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 SUOXP51687 545 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 RAD51Q06609 339 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 ABHD18Q0P651 414 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 UGP2Q16851 508 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 CRTC2Q53ET0 693 aaPredicted RBP12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 BNIPLQ7Z465 357 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 HEATR4Q86WZ0 1026 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 FAM131BQ86XD5 332 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 NRROSQ86YC3 692 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 TICAM1Q8IUC6 712 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 CCDC13Q8IYE1 715 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 ZDHHC1Q8WTX9 485 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 TEFMQ96QE5 360 aaKnown RBP12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 LGR4Q9BXB1 951 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 CUEDC1Q9NWM3 386 aaPredicted RBP12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 DNAI1Q9UI46 699 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 MOSPD1Q9UJG1 213 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 NEU3Q9UQ49 428 aa12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 KCTD3Q9Y597 815 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms