RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 KATNB1Q9BVA0 655 aa4.4□□□□□ -1.7
GTDC1-206ENST00000409214 TM6SF1Q9BZW5 370 aa4.4□□□□□ -1.7
GTDC1-206ENST00000409214 METTL7AQ9H8H3 244 aa4.4□□□□□ -1.7
GTDC1-206ENST00000409214 DDX19AQ9NUU7 478 aaKnown RBP4.4□□□□□ -1.7
GTDC1-206ENST00000409214 BEX4Q9NWD9 120 aaPredicted RBP4.4□□□□□ -1.7
GTDC1-206ENST00000409214 PAG1Q9NWQ8 432 aa4.4□□□□□ -1.7
GTDC1-206ENST00000409214 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.4□□□□□ -1.7
GTDC1-206ENST00000409214 PKD2L1Q9P0L9 805 aa4.4□□□□□ -1.7
GTDC1-206ENST00000409214 ANGPTL2Q9UKU9 493 aa4.4□□□□□ -1.7
GTDC1-206ENST00000409214 CAPN11Q9UMQ6 739 aa4.4□□□□□ -1.7
GTDC1-206ENST00000409214 STX8Q9UNK0 236 aa4.4□□□□□ -1.7
GTDC1-206ENST00000409214 PPIEQ9UNP9 301 aaKnown RBP4.4□□□□□ -1.7
GTDC1-206ENST00000409214 ACTL7AQ9Y615 435 aa4.4□□□□□ -1.7
GTDC1-206ENST00000409214 NPHP3Q7Z494 1330 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 COL15A1P39059 1388 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 SSH2Q76I76 1423 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 KLF18A0A0U1RQI7 1052 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 FAM90A8PA6NJQ4 464 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 ACOD1A6NK06 481 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 SLC38A8A6NNN8 435 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 A8MZ25 164 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 E7EWF7 191 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 PAPSS1O43252 624 aaPredicted RBP4.4□□□□□ -1.71
GTDC1-206ENST00000409214 CTDNEP1O95476 244 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 LY86O95711 162 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 GLP2RO95838 553 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 PCCBP05166 539 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 GLAP06280 429 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 FAM90A13PP0C7W8 464 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 FAM90A24PP0C7X0 464 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 HSPA8P11142 646 aaKnown RBP4.4□□□□□ -1.71
GTDC1-206ENST00000409214 ODC1P11926 461 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 ERCC2P18074 760 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 LBPP18428 481 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 ADRA2CP18825 462 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 HTR7P34969 479 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 WNT3P56703 355 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 RPL7AP62424 266 aaKnown RBP4.4□□□□□ -1.71
GTDC1-206ENST00000409214 OLR1P78380 273 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 SLC29A2Q14542 456 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 PGM5Q15124 567 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 GPR162Q16538 588 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 ERCC6LQ2NKX8 1250 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 WBP2NLQ6ICG8 309 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 USP17L6PQ6QN14 398 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 AFTPHQ6ULP2 937 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 MTERF4Q7Z6M4 381 aaKnown RBP4.4□□□□□ -1.71
GTDC1-206ENST00000409214 CDR2LQ86X02 465 aaPredicted RBP4.4□□□□□ -1.71
GTDC1-206ENST00000409214 RASAL3Q86YV0 1011 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 LRRC49Q8IUZ0 686 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 SLC15A3Q8IY34 581 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 CCDC105Q8IYK2 499 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 CADM4Q8NFZ8 388 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 CKAP2Q8WWK9 683 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 FAM89AQ96GI7 184 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 PARK7Q99497 189 aaKnown RBP4.4□□□□□ -1.71
GTDC1-206ENST00000409214 TBCDQ9BTW9 1192 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 SLC25A32Q9H2D1 315 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 HAUS4Q9H6D7 363 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 RAB9BQ9NP90 201 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 DDX4Q9NQI0 724 aaKnown RBP4.4□□□□□ -1.71
GTDC1-206ENST00000409214 BTBD7Q9P203 1132 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 MARCH4Q9P2E8 410 aaPredicted RBP4.4□□□□□ -1.71
GTDC1-206ENST00000409214 PCDHA7Q9UN72 937 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.4□□□□□ -1.71
GTDC1-206ENST00000409214 CDC42BPGQ6DT37 1551 aa4.4□□□□□ -1.71
GTDC1-206ENST00000409214 HGSO14964 777 aaPredicted RBP4.39□□□□□ -1.71
GTDC1-206ENST00000409214 RASAL1O95294 804 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 UQCRFS1P1P0C7P4 283 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 KRT5P13647 590 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 RPL11P62913 178 aaKnown RBP4.39□□□□□ -1.71
GTDC1-206ENST00000409214 FOXC1Q12948 553 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 TSTA3Q13630 321 aaPredicted RBP4.39□□□□□ -1.71
GTDC1-206ENST00000409214 PTPAQ15257 358 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 DLG2Q15700 870 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 SKIDA1Q1XH10 827 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 ZXDCQ2QGD7 858 aaPredicted RBP4.39□□□□□ -1.71
GTDC1-206ENST00000409214 DPCR1Q3MIW9 517 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 EMC10Q5UCC4 262 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 ERN2Q76MJ5 926 aaKnown RBP4.39□□□□□ -1.71
GTDC1-206ENST00000409214 LRRC8AQ8IWT6 810 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 UNC5BQ8IZJ1 945 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 CCDC155Q8N6L0 562 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 GBP7Q8N8V2 638 aaPredicted RBP4.39□□□□□ -1.71
GTDC1-206ENST00000409214 IQUBQ8NA54 791 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 KCNH5Q8NCM2 988 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 NSUN7Q8NE18 718 aaKnown RBP4.39□□□□□ -1.71
GTDC1-206ENST00000409214 OR13C2Q8NGS9 318 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 POC1BQ8TC44 478 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 WNT8BQ93098 351 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 SMARCE1Q969G3 411 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 CLIC6Q96NY7 704 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 FERMT1Q9BQL6 677 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 KCNH6Q9H252 994 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 WDCPQ9H6R7 721 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 RMND5AQ9H871 391 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 PFDN4Q9NQP4 134 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 FAM114A2Q9NRY5 505 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 USP40Q9NVE5 1235 aa4.39□□□□□ -1.71
GTDC1-206ENST00000409214 PREX1Q8TCU6 1659 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms