RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 DGKQP52824 942 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 C18orf21Q32NC0 220 aaPredicted RBP8.36□□□□□ -1.07
SNX13-201ENST00000409076 SV2CQ496J9 727 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 SLC44A4Q53GD3 710 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 LRRC73Q5JTD7 316 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 C10orf120Q5SQS8 335 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 LINGO4Q6UY18 593 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 RAB44Q7Z6P3 723 aaPredicted RBP8.36□□□□□ -1.07
SNX13-201ENST00000409076 ANKRD46Q86W74 232 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 LZTR1Q8N653 840 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 PNPT1Q8TCS8 783 aaKnown RBP8.36□□□□□ -1.07
SNX13-201ENST00000409076 SGCDQ92629 289 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 MARCH7Q9H992 704 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 CRTAC1Q9NQ79 661 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 POLE4Q9NR33 117 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 ATXN10Q9UBB4 475 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 TRAF6Q9Y4K3 522 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 ZCWPW2A0A1B0GU75 182 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 ANKRD33BA6NCL7 494 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 TRIM38O00635 465 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 CCNT2O60583 730 aaKnown RBP8.36□□□□□ -1.07
SNX13-201ENST00000409076 TMCC1O94876 653 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 TGFB3P10600 412 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 PAMP19021 973 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 THPOP40225 353 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 RGS2P41220 211 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 MAP3K10Q02779 954 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 SLC10A7Q0GE19 358 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 UGT2A3Q6UWM9 527 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 LSRQ86X29 649 aaPredicted RBP8.36□□□□□ -1.07
SNX13-201ENST00000409076 SPATA2LQ8IUW3 424 aaPredicted RBP8.36□□□□□ -1.07
SNX13-201ENST00000409076 GPRC5AQ8NFJ5 357 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 SMOQ99835 787 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 DUSP16Q9BY84 665 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 SUN2Q9UH99 717 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 RSL24D1Q9UHA3 163 aaKnown RBP8.36□□□□□ -1.07
SNX13-201ENST00000409076 FOCADQ5VW36 1801 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 MATN2O00339 956 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 CNPP09543 421 aaKnown RBP8.36□□□□□ -1.07
SNX13-201ENST00000409076 ZNF182P17025 639 aaPredicted RBP8.36□□□□□ -1.07
SNX13-201ENST00000409076 OXTRP30559 389 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 SLC5A2P31639 672 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 DCAF4L1Q3SXM0 396 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 ZNF484Q5JVG2 852 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 TMTC4Q5T4D3 741 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 KIAA0319Q5VV43 1072 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 CENPLQ8N0S6 344 aaPredicted RBP8.36□□□□□ -1.07
SNX13-201ENST00000409076 ATAD1Q8NBU5 361 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 RP9Q8TA86 221 aaKnown RBP8.36□□□□□ -1.07
SNX13-201ENST00000409076 DQX1Q8TE96 717 aaKnown RBP8.36□□□□□ -1.07
SNX13-201ENST00000409076 PSMG2Q969U7 264 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 ANKRD27Q96NW4 1050 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 AMBNQ9NP70 447 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 SELENONQ9NZV5 590 aa8.36□□□□□ -1.07
SNX13-201ENST00000409076 POLR2AP24928 1970 aaKnown RBP8.35□□□□□ -1.07
SNX13-201ENST00000409076 NPEPPSL1A6NEC2 478 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 ASB14A6NK59 587 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 A8MT66 165 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 KLF11O14901 512 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 MPOP05164 745 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 CTPS1P17812 591 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 PRDX3P30048 256 aaKnown RBP8.35□□□□□ -1.07
SNX13-201ENST00000409076 HOXA11P31270 313 aaPredicted RBP8.35□□□□□ -1.07
SNX13-201ENST00000409076 ACADSBP45954 432 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 STX5Q13190 355 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 LPIN1Q14693 890 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 AAGABQ6PD74 315 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 FRA10AC1Q70Z53 315 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 IFNLR1Q8IU57 520 aaPredicted RBP8.35□□□□□ -1.07
SNX13-201ENST00000409076 MFSD6LQ8IWD5 586 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 TMCO5AQ8N6Q1 288 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 DRAXINQ8NBI3 349 aaPredicted RBP8.35□□□□□ -1.07
SNX13-201ENST00000409076 SEMA3CQ99985 751 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 KCTD14Q9BQ13 255 aaPredicted RBP8.35□□□□□ -1.07
SNX13-201ENST00000409076 FRMD8Q9BZ67 464 aaPredicted RBP8.35□□□□□ -1.07
SNX13-201ENST00000409076 DNAI2Q9GZS0 605 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 AP5M1Q9H0R1 490 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 RHOJQ9H4E5 214 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 TRNAU1APQ9NX07 287 aaKnown RBP8.35□□□□□ -1.07
SNX13-201ENST00000409076 MIOSQ9NXC5 875 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 KRT87PA6NCN2 255 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 SYCE1LA8MT33 242 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 CBX4O00257 560 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 SDHDO14521 159 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 VILLO15195 856 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 ITGB1P05556 798 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 PSMA4P25789 261 aaKnown RBP8.35□□□□□ -1.07
SNX13-201ENST00000409076 CNTFP26441 200 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 KCNC1P48547 511 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 DCTN2Q13561 401 aaKnown RBP8.35□□□□□ -1.07
SNX13-201ENST00000409076 POLD3Q15054 466 aaPredicted RBP8.35□□□□□ -1.07
SNX13-201ENST00000409076 ZNF423Q2M1K9 1284 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 AGAP9Q5VTM2 703 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 SPESP1Q6UW49 350 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 KBTBD6Q86V97 674 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 METTL23Q86XA0 190 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 C7orf57Q8NEG2 295 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 SNX27Q96L92 541 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 TM6SF2Q9BZW4 377 aa8.35□□□□□ -1.07
SNX13-201ENST00000409076 PLK2Q9NYY3 685 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms