RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 VBP1P61758 197 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 CBX2Q14781 532 aaPredicted RBP12.09□□□□□ -0.47
SMCR8-201ENST00000406438 RAP1GAP2Q684P5 730 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 BPIFA1Q9NP55 256 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 EXD2Q9NVH0 621 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 MAT2BQ9NZL9 334 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 CEP170BQ9Y4F5 1589 aaPredicted RBP12.09□□□□□ -0.47
SMCR8-201ENST00000406438 XKRYO14609 159 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 HOXB6P17509 224 aaKnown RBP12.09□□□□□ -0.47
SMCR8-201ENST00000406438 ABL2P42684 1182 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 ABRQ12979 859 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 PTCHD4Q6ZW05 846 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 CEP68Q76N32 757 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 FAM98AQ8NCA5 519 aaKnown RBP12.09□□□□□ -0.47
SMCR8-201ENST00000406438 OR10G6Q8NH81 332 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 ACMSDQ8TDX5 336 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 NINJ2Q9NZG7 142 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 VWDEQ8N2E2 1590 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 ISM1B1AKI9 464 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 CHP2O43745 196 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 LRIG2O94898 1065 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 ZNF143P52747 638 aaPredicted RBP12.09□□□□□ -0.47
SMCR8-201ENST00000406438 CDKAL1Q5VV42 579 aa12.09□□□□□ -0.47
SMCR8-201ENST00000406438 CRADDP78560 199 aa12.08□□□□□ -0.47
SMCR8-201ENST00000406438 ZMYND11Q15326 602 aa12.08□□□□□ -0.47
SMCR8-201ENST00000406438 ARHGAP22Q7Z5H3 698 aa12.08□□□□□ -0.47
SMCR8-201ENST00000406438 RASAL3Q86YV0 1011 aa12.08□□□□□ -0.47
SMCR8-201ENST00000406438 STK32AQ8WU08 396 aa12.08□□□□□ -0.47
SMCR8-201ENST00000406438 TRAPPC12Q8WVT3 735 aa12.08□□□□□ -0.47
SMCR8-201ENST00000406438 LACRTQ9GZZ8 138 aa12.08□□□□□ -0.47
SMCR8-201ENST00000406438 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.08□□□□□ -0.47
SMCR8-201ENST00000406438 FBXO6Q9NRD1 293 aaPredicted RBP12.08□□□□□ -0.47
SMCR8-201ENST00000406438 COLEC10Q9Y6Z7 277 aa12.08□□□□□ -0.47
SMCR8-201ENST00000406438 CLUHO75153 1309 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 FAM86B1E9PN63 330 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 ASGR1P07306 291 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 GIMD1P0DJR0 217 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 SLC26A3P40879 764 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 FAM183BPQ6ZVS7 135 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 PDCD2LQ9BRP1 358 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 TM6SF2Q9BZW4 377 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 ITGB1BP2Q9UKP3 347 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 RPTORQ8N122 1335 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 SERPINA1P01009 418 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 ATP5F1P24539 256 aaPredicted RBP12.08□□□□□ -0.48
SMCR8-201ENST00000406438 ITPKBP27987 946 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 OLR1P78380 273 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 PPATQ06203 517 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 MAMLD1Q13495 774 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 ZIK1Q3SY52 487 aaPredicted RBP12.08□□□□□ -0.48
SMCR8-201ENST00000406438 CELF3Q5SZQ8 465 aaKnown RBP12.08□□□□□ -0.48
SMCR8-201ENST00000406438 TAPT1Q6NXT6 567 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 RTL4Q6ZR62 310 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 UNC93AQ86WB7 457 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 LRRC17Q8N6Y2 441 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 CERKQ8TCT0 537 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 NDNQ99608 321 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 DNAJC18Q9H819 358 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 L1RE1Q9UN81 338 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 A0A087X0B3 334 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 A0A1W2PQ72 361 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 INHBEP58166 350 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 SCRN3Q0VDG4 424 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 BNIP2Q12982 314 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 TRNT1Q96Q11 434 aaKnown RBP12.08□□□□□ -0.48
SMCR8-201ENST00000406438 SPATA9Q9BWV2 254 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 SF1Q15637 639 aaKnown RBP12.08□□□□□ -0.48
SMCR8-201ENST00000406438 PIH1D2Q8WWB5 315 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 RWDD3Q9Y3V2 267 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 FAM86C2PA6NEL3 165 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 RPL38P63173 70 aaKnown RBP12.08□□□□□ -0.48
SMCR8-201ENST00000406438 ZC3H12AQ5D1E8 599 aaKnown RBP12.08□□□□□ -0.48
SMCR8-201ENST00000406438 DEF8Q6ZN54 512 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 ARCQ7LC44 396 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 RDH11Q8TC12 318 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 CHID1Q9BWS9 393 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 SUV39H1O43463 412 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 ADRA1DP25100 572 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 AKT2P31751 481 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 ADCYAP1R1P41586 468 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 IFI35P80217 286 aaPredicted RBP12.08□□□□□ -0.48
SMCR8-201ENST00000406438 BEX3Q00994 111 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 HSF2Q03933 536 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 MED22Q15528 200 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 NOMO2Q5JPE7 1267 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 UNC5AQ6ZN44 842 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 ATCAYQ86WG3 371 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 SLC9A6Q92581 669 aa12.08□□□□□ -0.48
SMCR8-201ENST00000406438 NRXN1Q9ULB1 1477 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 SALL1Q9NSC2 1324 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 IFT172Q9UG01 1749 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 PTPN5P54829 565 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 RASGEF1AQ8N9B8 481 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 ATXN2Q99700 1313 aaKnown RBP12.07□□□□□ -0.48
SMCR8-201ENST00000406438 FER1L6Q2WGJ9 1857 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 CBX6O95503 412 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 PPIBP23284 216 aaKnown RBP12.07□□□□□ -0.48
SMCR8-201ENST00000406438 PPM1AP35813 382 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 HNF4AP41235 474 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 NDUFV1P49821 464 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms