RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, human

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-205	ENST00000405675	TK2	O00142	265 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	UNC5C	O95185	931 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	PDHA1	P08559	390 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	T-ENOL	P0DO92	83 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CDC25C	P30307	473 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	ZNF697	Q5TEC3	545 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	PDE12	Q6L8Q7	609 aa	Known RBP	29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	NAPRT	Q6XQN6	538 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	KIF2B	Q8N4N8	673 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	GPR78	Q96P69	363 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	OLFM1	Q99784	485 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	GDF15	Q99988	308 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SMG9	Q9H0W8	520 aa	Known RBP	29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	LHX3	Q9UBR4	397 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	DNAJC16	Q9Y2G8	782 aa		29.11	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TARS	P26639	723 aa	Known RBP	29.1	■■■□□ 2.25
CSNK1E-205	ENST00000405675	KCNJ2	P63252	427 aa		29.1	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CCDC91	Q7Z6B0	441 aa		29.1	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TBC1D1	Q86TI0	1168 aa	Predicted RBP	29.1	■■■□□ 2.25
CSNK1E-205	ENST00000405675	GCNA	Q96QF7	691 aa		29.1	■■■□□ 2.25
CSNK1E-205	ENST00000405675	UNK	Q9C0B0	810 aa	Known RBP	29.1	■■■□□ 2.25
CSNK1E-205	ENST00000405675	DNMT3B	Q9UBC3	853 aa	Known RBP	29.1	■■■□□ 2.25
CSNK1E-205	ENST00000405675	VPS51	Q9UID3	782 aa		29.1	■■■□□ 2.25
CSNK1E-205	ENST00000405675	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	RASSF9	O75901	435 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	S1PR4	O95977	384 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	GRK2	P25098	689 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CRABP2	P29373	138 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	AQP5	P55064	265 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	POU4F1	Q01851	419 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CDH18	Q13634	790 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CTC1	Q2NKJ3	1217 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	ASRGL1	Q7L266	308 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	PACS2	Q86VP3	889 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	NXNL1	Q96CM4	212 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TCEAL4	Q96EI5	215 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SLC46A2	Q9BY10	475 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	LSM7	Q9UK45	103 aa	Known RBP	29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	RAI2	Q9Y5P3	530 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	HCFC2	Q9Y5Z7	792 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	DENND4C	Q5VZ89	1909 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CCDC162P	A2VCL2	907 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	GOT2	P00505	430 aa	Known RBP	29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	HTR3D	Q70Z44	454 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	RTL10	Q7L3V2	364 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	ALYREF	Q86V81	257 aa	Known RBP	29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	RMDN1	Q96DB5	314 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CLEC4E	Q9ULY5	219 aa		29.09	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CBX6	O95503	412 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	COL6A2	P12110	1019 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	PTPN2	P17706	415 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	ABCE1	P61221	599 aa	Known RBP	29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	APCDD1	Q8J025	514 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TDRD5	Q8NAT2	981 aa	Known RBP	29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	KLHL29	Q96CT2	875 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SCYL1	Q96KG9	808 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	PLK2	Q9NYY3	685 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	HAO1	Q9UJM8	370 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	FCF1	Q9Y324	198 aa	Known RBP	29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SH3BP1	Q9Y3L3	701 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	DOCK6	Q96HP0	2047 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TRAV19	A0A0A6YYK7	116 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TYW5	A2RUC4	315 aa	Known RBP	29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	RPP40	O75818	363 aa	Known RBP	29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	MT-CO1	P00395	513 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SKIV2L2	P42285	1042 aa	Known RBP	29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	CLCN5	P51795	746 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TRAF2	Q12933	501 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	PPP2R2D	Q66LE6	453 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	LRRC8E	Q6NSJ5	796 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	ZYG11A	Q6WRX3	759 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TTC7B	Q86TV6	843 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	MFN1	Q8IWA4	741 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	FSTL5	Q8N475	847 aa	Predicted RBP	29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	LPCAT1	Q8NF37	534 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	SHKBP1	Q8TBC3	707 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	DDI1	Q8WTU0	396 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TSNARE1	Q96NA8	513 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	TXLNG	Q9NUQ3	528 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	PNPO	Q9NVS9	261 aa		29.08	■■■□□ 2.25
CSNK1E-205	ENST00000405675	ZBTB16	Q05516	673 aa		29.07	■■■□□ 2.24
CSNK1E-205	ENST00000405675	SEMA3A	Q14563	771 aa		29.07	■■■□□ 2.24
CSNK1E-205	ENST00000405675	GALNT7	Q86SF2	657 aa		29.07	■■■□□ 2.24
CSNK1E-205	ENST00000405675	MDGA1	Q8NFP4	955 aa		29.07	■■■□□ 2.24
CSNK1E-205	ENST00000405675	PEX13	Q92968	403 aa		29.07	■■■□□ 2.24
CSNK1E-205	ENST00000405675	OXSM	Q9NWU1	459 aa		29.07	■■■□□ 2.24
CSNK1E-205	ENST00000405675	MSRA	Q9UJ68	235 aa		29.07	■■■□□ 2.24
CSNK1E-205	ENST00000405675	ARIH1	Q9Y4X5	557 aa	Predicted RBP	29.07	■■■□□ 2.24
CSNK1E-205	ENST00000405675	TARM1	B6A8C7	271 aa		29.06	■■■□□ 2.24
CSNK1E-205	ENST00000405675	RHO	P08100	348 aa		29.06	■■■□□ 2.24
CSNK1E-205	ENST00000405675	CES1	P23141	567 aa		29.06	■■■□□ 2.24
CSNK1E-205	ENST00000405675	HOXA9	P31269	272 aa		29.06	■■■□□ 2.24
CSNK1E-205	ENST00000405675	ZNF140	P52738	457 aa	Predicted RBP	29.06	■■■□□ 2.24
CSNK1E-205	ENST00000405675	EPHA5	P54756	1037 aa		29.06	■■■□□ 2.24
CSNK1E-205	ENST00000405675	LAMB3	Q13751	1172 aa		29.06	■■■□□ 2.24
CSNK1E-205	ENST00000405675	NCEH1	Q6PIU2	408 aa		29.06	■■■□□ 2.24
CSNK1E-205	ENST00000405675	LCA5	Q86VQ0	697 aa		29.06	■■■□□ 2.24
CSNK1E-205	ENST00000405675	GABPB2	Q8TAK5	448 aa	Predicted RBP	29.06	■■■□□ 2.24
CSNK1E-205	ENST00000405675	GDPD5	Q8WTR4	605 aa		29.06	■■■□□ 2.24

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms