RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 AGAP3Q96P47 875 aa10.65□□□□□ -0.7
RPAIN-204ENST00000405578 NUDCD1Q96RS6 583 aa10.65□□□□□ -0.7
RPAIN-204ENST00000405578 IL12RB2Q99665 862 aa10.65□□□□□ -0.7
RPAIN-204ENST00000405578 FAM118BQ9BPY3 351 aa10.65□□□□□ -0.7
RPAIN-204ENST00000405578 PABPC3Q9H361 631 aaKnown RBP10.65□□□□□ -0.7
RPAIN-204ENST00000405578 CD248Q9HCU0 757 aa10.65□□□□□ -0.7
RPAIN-204ENST00000405578 FBXL12Q9NXK8 326 aa10.65□□□□□ -0.7
RPAIN-204ENST00000405578 GOLGA6AQ9NYA3 693 aa10.65□□□□□ -0.7
RPAIN-204ENST00000405578 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.65□□□□□ -0.7
RPAIN-204ENST00000405578 PCOLCE2Q9UKZ9 415 aa10.65□□□□□ -0.7
RPAIN-204ENST00000405578 COL6A6A6NMZ7 2263 aa10.65□□□□□ -0.7
RPAIN-204ENST00000405578 IGHV1OR15-9A0A0B4J2B8 117 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 FAM149AA5PLN7 773 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 GOLGA8CPA6NN73 597 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 J3QKU1 62 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 MID1O15344 667 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 SLC7A4O43246 635 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 SOCS5O75159 536 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 RNASEH2AO75792 299 aaKnown RBP10.64□□□□□ -0.71
RPAIN-204ENST00000405578 UGT2B4P06133 528 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 ITGAVP06756 1048 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 ITGB7P26010 798 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 PTPN3P26045 913 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 ITPKBP27987 946 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 MAXP61244 160 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 ZBTB17Q13105 803 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 TUBB2AQ13885 445 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 ZNF805Q5CZA5 627 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 ALG1LQ6GMV1 187 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 CCDC70Q6NSX1 233 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 FBXL19Q6PCT2 694 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 DRICH1Q6PGQ1 229 aaPredicted RBP10.64□□□□□ -0.71
RPAIN-204ENST00000405578 BRAT1Q6PJG6 821 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 ARHGEF18Q6ZSZ5 1173 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 RGL4Q8IZJ4 473 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 FAM71DQ8N9W8 422 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 KIF18AQ8NI77 898 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 HCAR2Q8TDS4 363 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 LRRN4Q8WUT4 740 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 ATG4AQ8WYN0 398 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 MAGOHBQ96A72 148 aaKnown RBP10.64□□□□□ -0.71
RPAIN-204ENST00000405578 CAPZA3Q96KX2 299 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 SEMA3CQ99985 751 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 TUBB2BQ9BVA1 445 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 SLC25A51Q9H1U9 297 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 SUV39H2Q9H5I1 410 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 NOD2Q9HC29 1040 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 ITM2CQ9NQX7 267 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 TOR4AQ9NXH8 423 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 DNPEPQ9ULA0 475 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 FZD4Q9ULV1 537 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 DRG1Q9Y295 367 aaKnown RBP10.64□□□□□ -0.71
RPAIN-204ENST00000405578 R3HDM2Q9Y2K5 976 aaKnown RBP10.64□□□□□ -0.71
RPAIN-204ENST00000405578 ATP8A1Q9Y2Q0 1164 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 KNTC1P50748 2209 aa10.64□□□□□ -0.71
RPAIN-204ENST00000405578 KNL1Q8NG31 2342 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 C5orf60A6NFR6 353 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 MUSKO15146 869 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 ZNF185O15231 689 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 NDUFS2O75306 463 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 IFNB1P01574 187 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 HLA-DQB2P05538 268 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 ATXN1LP0C7T5 689 aaKnown RBP10.63□□□□□ -0.71
RPAIN-204ENST00000405578 C7P10643 843 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 RGRP47804 291 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 TPMTP51580 245 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 SUOXP51687 545 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 NEK3P51956 506 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 WASHC5Q12768 1159 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 SNX1Q13596 522 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 P3H1Q32P28 736 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 NCEH1Q6PIU2 408 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 C4orf22Q6V702 233 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 B4GALNT4Q76KP1 1039 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 ERN2Q76MJ5 926 aaKnown RBP10.63□□□□□ -0.71
RPAIN-204ENST00000405578 ZNF567Q8N184 647 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.63□□□□□ -0.71
RPAIN-204ENST00000405578 ATL2Q8NHH9 583 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 GRK7Q8WTQ7 553 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 PDCD6IPQ8WUM4 868 aaKnown RBP10.63□□□□□ -0.71
RPAIN-204ENST00000405578 RAB7BQ96AH8 199 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 SPATA13Q96N96 652 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 KLHL32Q96NJ5 620 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 RUNDC3BQ96NL0 473 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 TMEM121Q9BTD3 319 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 AP1M1Q9BXS5 423 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 ADGRE3Q9BY15 652 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 HDAC8Q9BY41 377 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 CEP41Q9BYV8 373 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 BTBD1Q9H0C5 482 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 SLC6A17Q9H1V8 727 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 SGK2Q9HBY8 427 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 GLOD4Q9HC38 313 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 DKK3Q9UBP4 350 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 SUSD2Q9UGT4 822 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 RSPH14Q9UHP6 348 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 CYP8B1Q9UNU6 501 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 SSUH2Q9Y2M2 353 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 AAR2Q9Y312 384 aaKnown RBP10.63□□□□□ -0.71
RPAIN-204ENST00000405578 WASF2Q9Y6W5 498 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms