RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 CYHR1Q6ZMK1 362 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 DHFR2Q86XF0 187 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 CHERPQ8IWX8 916 aaKnown RBP12.03□□□□□ -0.48
RBM39-206ENST00000403542 PELI3Q8N2H9 469 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 DNAJB14Q8TBM8 379 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 DLG3Q92796 817 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 CASP10Q92851 521 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 SLC9A7Q96T83 725 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 PLXNA1Q9UIW2 1896 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 RNF103-CHMP3A0A140T963 221 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 RRN3P2A6NIE6 340 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 BTBD19C9JJ37 291 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 HHLA1C9JL84 531 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 H3BMM5 538 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 STRNO43815 780 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 ANXA9O76027 345 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 TMCC1O94876 653 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 CCR1P32246 355 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 HPCAP84074 193 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 PFKFB4Q16877 469 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 TBCELQ5QJ74 424 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 HECTD2Q5U5R9 776 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 LRRTM3Q86VH5 581 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 CLVS1Q8IUQ0 354 aaPredicted RBP12.03□□□□□ -0.48
RBM39-206ENST00000403542 FUNDC1Q8IVP5 155 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 NUDT8Q8WV74 236 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 VPS33AQ96AX1 596 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 RMND5BQ96G75 393 aaPredicted RBP12.03□□□□□ -0.48
RBM39-206ENST00000403542 DNAI2Q9GZS0 605 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 OLAHQ9NV23 265 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 EBF1Q9UH73 591 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 USP22Q9UPT9 525 aa12.03□□□□□ -0.48
RBM39-206ENST00000403542 HTRA2O43464 458 aaPredicted RBP12.02□□□□□ -0.48
RBM39-206ENST00000403542 ITGB1P05556 798 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 TFPTP0C1Z6 253 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 OXTRP30559 389 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 SLC10A7Q0GE19 358 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 APOFQ13790 326 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 IHHQ14623 411 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 AGAP9Q5VTM2 703 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 DCLRE1AQ6PJP8 1040 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 TLK2Q86UE8 772 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 C2CD4AQ8NCU7 369 aaPredicted RBP12.02□□□□□ -0.48
RBM39-206ENST00000403542 PTERQ96BW5 349 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 FBXL20Q96IG2 436 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 PPP1R10Q96QC0 940 aaKnown RBP12.02□□□□□ -0.48
RBM39-206ENST00000403542 HBEGFQ99075 208 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 VAT1Q99536 393 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 AKTIPQ9H8T0 292 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 MID1IP1Q9NPA3 183 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 LMCD1Q9NZU5 365 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 NDUFA13Q9P0J0 144 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 IPO11Q9UI26 975 aaKnown RBP12.02□□□□□ -0.48
RBM39-206ENST00000403542 TIMM22Q9Y584 194 aa12.02□□□□□ -0.48
RBM39-206ENST00000403542 LOC285556D6RIA3 1793 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 CCL15-CCL14A0A0B4J2E2 113 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 A0A0J9YYE9 177 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 UBXN8O00124 270 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 TSPAN3O60637 253 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 H6PDO95479 791 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 THP07101 528 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 LTA4HP09960 611 aaKnown RBP12.02□□□□□ -0.49
RBM39-206ENST00000403542 HAPLN1P10915 354 aaPredicted RBP12.02□□□□□ -0.49
RBM39-206ENST00000403542 ARL1P40616 181 aaPredicted RBP12.02□□□□□ -0.49
RBM39-206ENST00000403542 HADHAP40939 763 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 CSRP3P50461 194 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 SH3BP2P78314 561 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 PRKCQQ04759 706 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 CCL14Q16627 93 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 CCL15Q16663 113 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 KLC3Q6P597 504 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 RIN3Q8TB24 985 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 BLOC1S5Q8TDH9 187 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 TRPC4APQ8TEL6 797 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 SMARCD1Q96GM5 515 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 MAELQ96JY0 434 aaKnown RBP12.02□□□□□ -0.49
RBM39-206ENST00000403542 ABHD16BQ9H3Z7 469 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 NSMCE4AQ9NXX6 385 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 CDC14AQ9UNH5 594 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 PHF24Q9UPV7 400 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 MYRFQ9Y2G1 1151 aa12.02□□□□□ -0.49
RBM39-206ENST00000403542 NME4O00746 187 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 TBX18O95935 607 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 F9P00740 461 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 PAMP19021 973 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 GRIK1P39086 918 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 PRKAA2P54646 552 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 STX1BP61266 288 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 PLCL1Q15111 1095 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 RPS6KA2Q15349 733 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 RABL3Q5HYI8 236 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 NAT16Q8N8M0 369 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 PTGR2Q8N8N7 351 aaPredicted RBP12.01□□□□□ -0.49
RBM39-206ENST00000403542 DPF3Q92784 378 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 TUBGCP3Q96CW5 907 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 C19orf60Q96EN9 201 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 TBATAQ96M53 351 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 SMIM14Q96QK8 99 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 SLC2A11Q9BYW1 496 aa12.01□□□□□ -0.49
RBM39-206ENST00000403542 RSL24D1Q9UHA3 163 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms