RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CEPT1Q9Y6K0 416 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 SLC4A4Q9Y6R1 1079 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 A8MZ25 164 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 KDM4EB2RXH2 506 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 H0YGN5 161 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 LDB2O43679 373 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 CNOT3O75175 753 aaKnown RBP4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 AGAP20933 346 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 EIF2S3P41091 472 aaKnown RBP4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 GABRB2P47870 512 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 RFX5P48382 616 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 SELENOVP59797 346 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 TRAF1Q13077 416 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 OLIG2Q13516 323 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 NAE1Q13564 534 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 KLF9Q13886 244 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 MYBPC2Q14324 1141 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 CRYMQ14894 314 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 RABEP1Q15276 862 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 RBMS2Q15434 407 aaKnown RBP4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 ZNF284Q2VY69 593 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 ZSCAN23Q3MJ62 389 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 CDONQ4KMG0 1287 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 WASHC2DQ5SRD0 308 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 LRIF1Q5T3J3 769 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 C10orf25Q5T742 122 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 TMEM198Q66K66 360 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 ANKRD54Q6NXT1 300 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 TMEM154Q6P9G4 183 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 GSTA5Q7RTV2 222 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 MB21D2Q8IYB1 491 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 ZDHHC23Q8IYP9 409 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 ADGRF2Q8IZF7 708 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 SCML4Q8N228 414 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 TMEM199Q8N511 208 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 LSMEM1Q8N8F7 131 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 MIGA1Q8NAN2 632 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 HJURPQ8NCD3 748 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 FBXL8Q96CD0 374 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 PPP1R13BQ96KQ4 1090 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 SERINC2Q96SA4 455 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 GAD1Q99259 594 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 MAK16Q9BXY0 300 aaKnown RBP4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 IFIH1Q9BYX4 1025 aaKnown RBP4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 PDE7BQ9NP56 450 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 NRIP3Q9NQ35 241 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 ANKRD10Q9NXR5 420 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 FBXL17Q9UF56 701 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 ZMYM2Q9UBW7 1377 aa4.01□□□□□ -1.77
HMGB1P17-201ENST00000403495 A0A1W2PRG0 241 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 J3KR12 359 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 TAF4O00268 1085 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 CHL1O00533 1208 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 MDM4O15151 490 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 ENTPD3O75355 529 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 ERAL1O75616 437 aaKnown RBP4□□□□□ -1.77
HMGB1P17-201ENST00000403495 TSPAN9O75954 239 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 EPN2O95208 641 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 DNTTP04053 509 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 HSP90AA1P07900 732 aaKnown RBP4□□□□□ -1.77
HMGB1P17-201ENST00000403495 G6PDP11413 515 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 ENO3P13929 434 aaPredicted RBP4□□□□□ -1.77
HMGB1P17-201ENST00000403495 PRF1P14222 555 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 PSMB10P40306 273 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 EIF2DP41214 584 aaKnown RBP4□□□□□ -1.77
HMGB1P17-201ENST00000403495 PIK3CAP42336 1068 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 COMPP49747 757 aaPredicted RBP4□□□□□ -1.77
HMGB1P17-201ENST00000403495 LRMPQ12912 555 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 STK4Q13043 487 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 DUSP6Q16828 381 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 EIF2S3LQ2VIR3 472 aaKnown RBP4□□□□□ -1.77
HMGB1P17-201ENST00000403495 RAB41Q5JT25 222 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 GLDNQ6ZMI3 551 aaPredicted RBP4□□□□□ -1.77
HMGB1P17-201ENST00000403495 DEF8Q6ZN54 512 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 BRINP3Q76B58 766 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 TRILQ7L0X0 811 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 PIP4P1Q86T03 277 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 CAMK1DQ8IU85 385 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 RBFAQ8N0V3 343 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 NANOGP1Q8N7R0 232 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 POMGNT1Q8WZA1 660 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 SNAPC3Q92966 411 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 ARHGEF26Q96DR7 871 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 ZNF333Q96JL9 665 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 ZNF570Q96NI8 536 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 SLF1Q9BQI6 1058 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 SEMA4CQ9C0C4 833 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 PLK3Q9H4B4 646 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 PDZD7Q9H5P4 517 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 GPR108Q9NPR9 543 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 SIRT3Q9NTG7 399 aaPredicted RBP4□□□□□ -1.77
HMGB1P17-201ENST00000403495 PTGFRNQ9P2B2 879 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 CHORDC1Q9UHD1 332 aaPredicted RBP4□□□□□ -1.77
HMGB1P17-201ENST00000403495 TMEM5Q9Y2B1 443 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 FRMD4BQ9Y2L6 1034 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 PTRH2Q9Y3E5 179 aaKnown RBP4□□□□□ -1.77
HMGB1P17-201ENST00000403495 SNX8Q9Y5X2 465 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 SESN1Q9Y6P5 492 aa4□□□□□ -1.77
HMGB1P17-201ENST00000403495 BECN2A8MW95 431 aa3.99□□□□□ -1.77
HMGB1P17-201ENST00000403495 CTDSP2O14595 271 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms