RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 MMP2P08253 660 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 CES1P23141 567 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 CD86P42081 329 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 ALDH1A3P47895 512 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 SUOXP51687 545 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 USP46P62068 366 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 SULT2A1Q06520 285 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 SERINC3Q13530 473 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 MRPL58Q14197 206 aaKnown RBP13.08□□□□□ -0.32
PRAME-203ENST00000402697 SPATS1Q496A3 300 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 C5orf22Q49AR2 442 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 ALG1LQ6GMV1 187 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 RNF111Q6ZNA4 994 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 RAB44Q7Z6P3 723 aaPredicted RBP13.08□□□□□ -0.32
PRAME-203ENST00000402697 RHEBL1Q8TAI7 183 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 SPPL2BQ8TCT7 592 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 AGR3Q8TD06 166 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 LRGUKQ96M69 825 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 CATSPER2Q96P56 530 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 CYP2S1Q96SQ9 504 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 SLC25A23Q9BV35 468 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 UNC93B1Q9H1C4 597 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 GTSE1Q9NYZ3 720 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 DTNAQ9Y4J8 743 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 CCDC78A2IDD5 438 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 TCAF2A6NFQ2 919 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 BBIP1A8MTZ0 92 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 UBDO15205 165 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 GPC4O75487 556 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 S1PR4O95977 384 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 ITGB1P05556 798 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 CCDC166P0CW27 439 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 CKBP12277 381 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 ITKQ08881 620 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 MBTPS1Q14703 1052 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 POLD3Q15054 466 aaPredicted RBP13.08□□□□□ -0.32
PRAME-203ENST00000402697 PDCD2Q16342 344 aaPredicted RBP13.08□□□□□ -0.32
PRAME-203ENST00000402697 MMEL1Q495T6 779 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 RTN4RL1Q86UN2 441 aaPredicted RBP13.08□□□□□ -0.32
PRAME-203ENST00000402697 CUZD1Q86UP6 607 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 SLC43A3Q8NBI5 491 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 SLAIN1Q8ND83 568 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 ARRDC2Q8TBH0 407 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 ZFAND2BQ8WV99 257 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 ASB9Q96DX5 294 aa13.08□□□□□ -0.32
PRAME-203ENST00000402697 DUS3LQ96G46 650 aaKnown RBP13.08□□□□□ -0.32
PRAME-203ENST00000402697 FAM193BQ96PV7 902 aaPredicted RBP13.08□□□□□ -0.32
PRAME-203ENST00000402697 TSEN34Q9BSV6 310 aaKnown RBP13.08□□□□□ -0.32
PRAME-203ENST00000402697 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.08□□□□□ -0.32
PRAME-203ENST00000402697 PRAMEF11O60813 436 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 ZMPSTE24O75844 475 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 GLP2RO95838 553 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 FGF4P08620 206 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 CHRNA4P43681 627 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 THOP1P52888 689 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 SLC10A7Q0GE19 358 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 ADGRE1Q14246 886 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 PTK2BQ14289 1009 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 PCSK7Q16549 785 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 ZNF280DQ6N043 979 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 MARVELD2Q8N4S9 558 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 BRSK1Q8TDC3 778 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 ZNF296Q8WUU4 475 aaPredicted RBP13.07□□□□□ -0.32
PRAME-203ENST00000402697 OLFM1Q99784 485 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 EBF3Q9H4W6 596 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 ELAC1Q9H777 363 aaKnown RBP13.07□□□□□ -0.32
PRAME-203ENST00000402697 INTS10Q9NVR2 710 aaKnown RBP13.07□□□□□ -0.32
PRAME-203ENST00000402697 MARCH2Q9P0N8 246 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 GMIPQ9P107 970 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 TMCO1Q9UM00 188 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 VPS9D1Q9Y2B5 631 aa13.07□□□□□ -0.32
PRAME-203ENST00000402697 ARIH1Q9Y4X5 557 aaPredicted RBP13.07□□□□□ -0.32
PRAME-203ENST00000402697 B4GALT3O60512 393 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 VPS4BO75351 444 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 ATXN1LP0C7T5 689 aaKnown RBP13.06□□□□□ -0.32
PRAME-203ENST00000402697 FDXRP22570 491 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 PSMA3P25788 255 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 ELAVL2Q12926 359 aaKnown RBP13.06□□□□□ -0.32
PRAME-203ENST00000402697 ZNF460Q14592 562 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 SFT2D3Q587I9 215 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 SIRPB2Q5JXA9 342 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 RBM20Q5T481 1227 aaKnown RBP13.06□□□□□ -0.32
PRAME-203ENST00000402697 FBXL22Q6P050 247 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 CLYBLQ8N0X4 340 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 FBXO32Q969P5 355 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 ROPN1LQ96C74 230 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 PABPC5Q96DU9 382 aaKnown RBP13.06□□□□□ -0.32
PRAME-203ENST00000402697 TCF12Q99081 682 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 MAGEH1Q9H213 219 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 EPB41L1Q9H4G0 881 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 TFB2MQ9H5Q4 396 aaKnown RBP13.06□□□□□ -0.32
PRAME-203ENST00000402697 SYTL2Q9HCH5 934 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 HMX1Q9NP08 348 aaPredicted RBP13.06□□□□□ -0.32
PRAME-203ENST00000402697 PLK2Q9NYY3 685 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 UXTQ9UBK9 157 aaPredicted RBP13.06□□□□□ -0.32
PRAME-203ENST00000402697 TRAF6Q9Y4K3 522 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 PRSS51A0A1B0GVH4 220 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 J3KR12 359 aa13.06□□□□□ -0.32
PRAME-203ENST00000402697 PSMD12O00232 456 aaPredicted RBP13.06□□□□□ -0.32
PRAME-203ENST00000402697 ACOT8O14734 319 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms