RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 PBX3P40426 434 aa23.18■■□□□ 1.3
RABGGTA-202ENST00000399409 OR1G1P47890 313 aa23.18■■□□□ 1.3
RABGGTA-202ENST00000399409 USP46P62068 366 aa23.18■■□□□ 1.3
RABGGTA-202ENST00000399409 CACNB2Q08289 660 aaPredicted RBP23.18■■□□□ 1.3
RABGGTA-202ENST00000399409 MTA1Q13330 715 aa23.18■■□□□ 1.3
RABGGTA-202ENST00000399409 GRM2Q14416 872 aa23.18■■□□□ 1.3
RABGGTA-202ENST00000399409 POLD3Q15054 466 aaPredicted RBP23.18■■□□□ 1.3
RABGGTA-202ENST00000399409 USP13Q92995 863 aaPredicted RBP23.18■■□□□ 1.3
RABGGTA-202ENST00000399409 IGSF8Q969P0 613 aa23.18■■□□□ 1.3
RABGGTA-202ENST00000399409 NPAS2Q99743 824 aa23.18■■□□□ 1.3
RABGGTA-202ENST00000399409 Q9H521 79 aa23.18■■□□□ 1.3
RABGGTA-202ENST00000399409 GABRQQ9UN88 632 aa23.18■■□□□ 1.3
RABGGTA-202ENST00000399409 GRK4P32298 578 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 DPP6P42658 865 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 MAPKAPK2P49137 400 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 NFKB2Q00653 900 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 SERINC3Q13530 473 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 CLLU1OSQ5K130 101 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 BHLHE22Q8NFJ8 381 aaPredicted RBP23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 ADCY4Q8NFM4 1077 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 GPR150Q8NGU9 434 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 ANKRD49Q8WVL7 239 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 FBXO32Q969P5 355 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 FEM1CQ96JP0 617 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 GSTO2Q9H4Y5 243 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 TRMT13Q9NUP7 481 aaKnown RBP23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 LDB2O43679 373 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 GPC4O75487 556 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 SLC10A3P09131 477 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 HLA-DPA1P20036 260 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 ARSDP51689 593 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 CDKN2DP55273 166 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 MRPS22P82650 360 aaKnown RBP23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 MS4A2Q01362 244 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 PTK2BQ14289 1009 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 IHHQ14623 411 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 VARS2Q5ST30 1063 aaKnown RBP23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 FOXB2Q5VYV0 432 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 RAP1GAP2Q684P5 730 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 GK5Q6ZS86 529 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 PGBD5Q8N414 524 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 TMA16Q96EY4 203 aaKnown RBP23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 DCUN1D1Q96GG9 259 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 CENPKQ9BS16 269 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 TLR8Q9NR97 1041 aaKnown RBP23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 MARCH2Q9P0N8 246 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 EPS15L1Q9UBC2 864 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 TRAF6Q9Y4K3 522 aa23.17■■□□□ 1.3
RABGGTA-202ENST00000399409 PSMD12O00232 456 aaPredicted RBP23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 ACOT8O14734 319 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 DENRO43583 198 aaKnown RBP23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 EPOP01588 193 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 FGF1P05230 155 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 FLT3LGP49771 235 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 ATP4BP51164 291 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 PSME3P61289 254 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 FAM189BP81408 668 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 FOLH1Q04609 750 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 SREBF2Q12772 1141 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 PDK3Q15120 406 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 RTN4RL1Q86UN2 441 aaPredicted RBP23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 TOP1MTQ969P6 601 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 POLR1EQ9GZS1 481 aaKnown RBP23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 POPDC3Q9HBV1 291 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 RIMS3Q9UJD0 308 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 SARDHQ9UL12 918 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 RIMKLBQ9ULI2 386 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 FIS1Q9Y3D6 152 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 OR6C75A6NL08 312 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 MAP3K13O43283 966 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 IGLV3-27P01718 113 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 TRIM32Q13049 653 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 FASTKQ14296 549 aaKnown RBP23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 CTXN3Q4LDR2 81 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 PHF21BQ96EK2 531 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 FAM193BQ96PV7 902 aaPredicted RBP23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 ASB2Q96Q27 587 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 UNC93B1Q9H1C4 597 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 COMMD8Q9NX08 183 aa23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 SUCOQ9UBS9 1254 aaKnown RBP23.16■■□□□ 1.3
RABGGTA-202ENST00000399409 AP1G1O43747 822 aa23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 GLP2RO95838 553 aa23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 FDXRP22570 491 aa23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 CLCN2P51788 898 aa23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 C1QTNF8P60827 252 aa23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 RING1Q06587 406 aa23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 FRMPD3Q5JV73 1810 aa23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 ZNF678Q5SXM1 525 aa23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 MRNIPQ6NTE8 343 aa23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 ISCA2Q86U28 154 aa23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 RPRD1AQ96P16 312 aaPredicted RBP23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 ALG9Q9H6U8 611 aa23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 MARCH4Q9P2E8 410 aaPredicted RBP23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 RAB26Q9ULW5 256 aa23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 PCDHGA7Q9Y5G6 932 aa23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 TTC3P53804 2025 aa23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 PRSS51A0A1B0GVH4 220 aa23.15■■□□□ 1.3
RABGGTA-202ENST00000399409 PRAMEF11O60813 436 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms